Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01495 TCTCTATTCCCTGGATTGGATGTGGACACAAAAACAAAAACTGGAGCTTTGCGCTTTGAAGATACAAAAGAAAGAATCCAAAAATTGTTCAAAAATGTTGAACTTTCAGTTTCTGCATATGATACTGCATGGGTGGCAATGGTCCCTTCTCCAAACTCTCTTAATAAACCTCTTTTTCCGGAGTGCATAAACTGGGTATTAGATCATCAAAACCCTGATGGATCATGGGGCATACTCCATGACCATCAGTTGGTGATGAAAGCCACTCTCTTATCCACATTAGCATGTGTTCTTACTCTTAAACGATGGAATATTGGTCATGATCATATGAGCAAGGCCCTTAGTTTTATCAAGTCTAATATAGCTTCAGCTACTGATGAGAATCAACGTTCTCCTGTGGGATTTGACATAATTTTCCCTGGTATGATTGAGTATGCTAAAGACTTGAATTTGAATCTACCCTTGGCATCAATGAATGTGGATGCTTTGGTTCAAAAGAAAGAGTTGGAGCTTAGAAGCTGCTGTAGCAACTCTGAAGGAGGAAAAGCCTATTTAGCGTATGTTTCAGAAGGAATTGGAAAGTTACAGGACTGGGATATGGTCATGCAATATCAAAGGAAGAACGGATCACTGTTTAGTTCTCCATCCACCACAGCAGTGGCTTTTATGCACAGAAATGATGATGGCTGCTTTAATTACCTTCGCTCAATCTTACAAAAGTTTCATAGTTCAGTTCCCGCAATATATCCTCTTGATATATATGCTCGTTTACACATGGTTGATAGCCTTCAAAAACTGGGGATTGATCGCCATTTCAAAGATGAGATTAGAAGTGTATTAGATGAAACGTACAGATGTTGGATGCAAGGAGAGGAAAATATATTCCTAGATGCTTCAACTTGTGCAATGGCCTTCCGGATGTTACGTGTTGAAGGATATGATGTTTCTTCAGATCAATTGACTCAATTCTCAGAAGATCTCTTTCCAAATTGCCTTGGAGGACATTTAAAAGACTTTGGTGCCTCACTAGAGTTATTTAAGGCCTCCCAGATTATCATTTATCCGGATGAGTTTATTCTGGAAAATATAAACTCTTGGACTAGTCGTTTCCTGAATCATGGATTATCTGGTGGTTCGGTTCATTCTGATAGAACTGAGAGACTCGTGAAACAAGAGGCAGTTAATGCTTTCGAGTTCCCCTATAATTCAACTCTGGAACGCTTATCAAATAAGCGAGCACTGGAAAGTTACAGTGGAGACATTGTCAGGATTTCAAAAACAACATATGCCTGCTTAAATTTTGGTCATCAAGATTTCCTGGAACTTGCTGTAGAAGATTTCAATACCCTGCAATGCATACATCGCAAGGAACTGAAAGAGCTTGAAAAATGGGTCATCGAAAACAAACTGGACAAGTTGAAATTTGCCAGACAGAAGTTAGCGTACTGCTATTTTTCTGCTGCAGCGACCCTAACTTCTCCAGAACTTTGTGATGCTCGCTTATCATGGGCAAAAAATGGGGTACTCACAACCGTGGTTGATGATTTCTTTGATGTTGGAGGATCTGAAGAGGAATTGGTAAACCTTATACAATTGGTGGAAAAGTGGGATGCCAGTGGGGAAGCGGGTTACTGTTCCAAGGAGGTTGAGATTATATTTCTTGCACTTCATAGCACAATTTGTGAAATAGGAGAAAAAGCTTTACCATGGCAAGGACGCAGCGTGACGAGGAATGTTATCGATATTTGGTTGGCTTTGCTCGAGTCAATGAGGAAGGAAGCTGAATGGTTGAAAAATAAGGTAGTGCCATCATTGGATGAGTACATGGAAAATGGCTATGTATCATTTGCTTTGGGGCCTATAGTCCTTCCAACGCTCTACTTTGTTGGACCTAAGCTTCCTGAGGAAATTATTGGAAATTGTGAATACCAGAAGCTCTTTAAGCTGATGAGCACTTCTGGCCGCCTTCTGAATGATACTCGAACTTTTGATAGAGAGTCCAGTGAAGGGAAACTGAATGCCTTGTCTCTATACTTGATTAGTGCCGGTGGTAAGCTCAGCAAAGAGGAGGCCACTGAAGCAATGAAAGGAGATGTTGATAGGACGAGAAGAGAACTGCTTAGATTAGTTTTGCAGGAGAACAGTACAATTCCAAGAGCTTGTAAGGATTTGTTCTGGAAAATGAGCTGTGTTGTGCATCTATTTTACAGGAAAGATGATGGGTTTACTTCCCATGAGTTGATGAACTCTGCGAAAGCCTTATTCGAACTACCCATGGTTCTGGATGAACTTTTGAACAAACGAAACACAAAAGAAATAAGTTAA 2325 40.26 SLFPGLDVDTKTKTGALRFEDTKERIQKLFKNVELSVSAYDTAWVAMVPSPNSLNKPLFPECINWVLDHQNPDGSWGILHDHQLVMKATLLSTLACVLTLKRWNIGHDHMSKALSFIKSNIASATDENQRSPVGFDIIFPGMIEYAKDLNLNLPLASMNVDALVQKKELELRSCCSNSEGGKAYLAYVSEGIGKLQDWDMVMQYQRKNGSLFSSPSTTAVAFMHRNDDGCFNYLRSILQKFHSSVPAIYPLDIYARLHMVDSLQKLGIDRHFKDEIRSVLDETYRCWMQGEENIFLDASTCAMAFRMLRVEGYDVSSDQLTQFSEDLFPNCLGGHLKDFGASLELFKASQIIIYPDEFILENINSWTSRFLNHGLSGGSVHSDRTERLVKQEAVNAFEFPYNSTLERLSNKRALESYSGDIVRISKTTYACLNFGHQDFLELAVEDFNTLQCIHRKELKELEKWVIENKLDKLKFARQKLAYCYFSAAATLTSPELCDARLSWAKNGVLTTVVDDFFDVGGSEEELVNLIQLVEKWDASGEAGYCSKEVEIIFLALHSTICEIGEKALPWQGRSVTRNVIDIWLALLESMRKEAEWLKNKVVPSLDEYMENGYVSFALGPIVLPTLYFVGPKLPEEIIGNCEYQKLFKLMSTSGRLLNDTRTFDRESSEGKLNALSLYLISAGGKLSKEEATEAMKGDVDRTRRELLRLVLQENSTIPRACKDLFWKMSCVVHLFYRKDDGFTSHELMNSAKALFELPMVLDELLNKRNTKEIS 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19667710 19672548 + MELO3C012592.2.1 Cme01g01495 318471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01495 774 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 39 223 IPR008930 -
Cme01g01495 774 SUPERFAMILY Terpenoid synthases 437 747 IPR008949 -
Cme01g01495 774 Pfam Terpene synthase family, metal binding domain 440 704 IPR005630 GO:0000287|GO:0010333|GO:0016829
Cme01g01495 774 Gene3D - 36 238 - -
Cme01g01495 774 Gene3D - 31 447 IPR036965 GO:0010333|GO:0016829
Cme01g01495 774 PANTHER ENT-KAUR-16-ENE SYNTHASE, CHLOROPLASTIC 29 753 - -
Cme01g01495 774 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 207 419 IPR008930 -
Cme01g01495 774 SFLD Terpene Cyclase Like 1 N-term 6 430 - -
Cme01g01495 774 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 29 753 - -
Cme01g01495 774 Pfam Terpene synthase, N-terminal domain 197 388 IPR001906 GO:0010333|GO:0016829
Cme01g01495 774 Gene3D Farnesyl Diphosphate Synthase 450 767 IPR008949 -
Cme01g01495 774 CDD Terpene_cyclase_plant_C1 249 756 IPR044814 GO:0010333|GO:0016102
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01495 Cme-Chr1:19667710 Cme05g00373 Cme-Chr5:2965741 1.18E-87 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01495 K04121 - csv:101217426 1488.78