Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01496 ATGGAGGACGGCTTTGCAGCTGAAAAGCTCTTCAATCAGGGATTTTCCTACACCTACGACGATGTCATCTTCCTTCCTCACTACATTGACTTCCCCACTGACTCTGTCCAACTTGCTACCCGACTCACCCGCAATATCTCTCTCTCCATTCCATGCGTTTCTTCCTCCATGGACACCGTCACCGAAACCTACATGGCTTCTGCCATGGCTGCTCTTGGCGGCATCGGTATCATCCATTCCAATTGCCCTGCCTCCCAACAAGCTGCCATGGTTCATGCCGCCAAGGCCCGCCGAGTTCCTATTTTGTCCAATCTTGTTTTCAAGTCCCCATCCGATCGGATTGACTCCGATGACGATTTTGCTTCTTCGCCCTTCATTTTAGTTACAGAGTCAGGTACCTCTAAGTCCAAGCTTTTGGGCTACGTCTCGTACGCGGATTGGACTTCCCAGGGGAACAAGGAAGTAAAAATATATGATTATATGGTTAATTCGGGGGCTTCAGTTCCGTGGAACTATGATTTAGGGCAATTGGACGCGTTTTTGGAGGAAAACAAGAAGGACTTTGTGCCGCTGTTAAAGGACGGCGAAGTTGTGGATGTTGCGACAAAGTCGGAAGTAGAGAGAATCAAGAGTTATCCAAAACTGGGTGTTGGGTCGGTTGCGGCCGATGGTTCCTGGCTGGTGGGGGCTTCGATTGGAACAAGGGAACATGACAAGGAAAGGCTCAAGCTTCTAGTGCAGGCAGGTATAAACGTAGTGGTGTTGGATAGTTCACAGGGTAACTCCAGTTATCAGATTGATATGATAAAGTATGTGAAGCGGACATATCCAGAGTTGGACGTGATTGGGGGAAATGTAGTGACGATGGCACAAGCCCAGAATTTGATTCAAGCTGGAGTTGATGGGTTGCGGATTGGGATGGGTTCTGGATCTATCTGTACTACTCAGGAGGTTTGTGCGGTTGGACGAGGACAGGCGACGGCGGTTTACAAGGTCTCATTAGTTGCTTCGCACAGTGGCGTGCCAGTTATCGCTGATGGTGGAATTTCAAACTCTGGGCATATTGTTAAGGCTTTAGTTCTTGGGGCATCAACGGTAATGATGGGAAGTTTCTTGGCTGGAAGCACCGAGGCCCCTGGGGCCTTCGAAACGAAGAATGGTCAGCGTGTAAAGAAATATCGGGGGATGGGGTCTTTAGAAGCAATGATCAAAGGAAGTGATGCGAGGTACTTGGGGGATACTGCAACCCTTAAGATAGCTCAGGGGGTTGTTGGAGCAGTTGCTGATAAGGGTTCAGTCTTGAAGTTCATACCCTATACCATGCAAGCAGTGAAGCAAGGGTTCCAAGATCTTGGTGCTTCTTCCATCAAATCTGCCCATGACCTCTTAAGCTCAAAGGTTTTAAGGCTAGAGGTCCGTACAGGGGCAGCACAGGTTGAAGGTGGAATTCATGGATTGGTCTCTTATGAAAAGAGATCTTTTTAA 1485 48.48 MEDGFAAEKLFNQGFSYTYDDVIFLPHYIDFPTDSVQLATRLTRNISLSIPCVSSSMDTVTETYMASAMAALGGIGIIHSNCPASQQAAMVHAAKARRVPILSNLVFKSPSDRIDSDDDFASSPFILVTESGTSKSKLLGYVSYADWTSQGNKEVKIYDYMVNSGASVPWNYDLGQLDAFLEENKKDFVPLLKDGEVVDVATKSEVERIKSYPKLGVGSVAADGSWLVGASIGTREHDKERLKLLVQAGINVVVLDSSQGNSSYQIDMIKYVKRTYPELDVIGGNVVTMAQAQNLIQAGVDGLRIGMGSGSICTTQEVCAVGRGQATAVYKVSLVASHSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAFETKNGQRVKKYRGMGSLEAMIKGSDARYLGDTATLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSIKSAHDLLSSKVLRLEVRTGAAQVEGGIHGLVSYEKRSF 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19673329 19676073 - MELO3C012593.2.1 Cme01g01496 318472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01496 494 SUPERFAMILY CBS-domain pair 126 207 IPR046342 -
Cme01g01496 494 Hamap Inosine-5'-monophosphate dehydrogenase [guaB]. 16 492 IPR005990 GO:0003938|GO:0006164
Cme01g01496 494 PANTHER INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED 2 494 IPR005990 GO:0003938|GO:0006164
Cme01g01496 494 SMART IMPDH_2 15 484 - -
Cme01g01496 494 ProSitePatterns IMP dehydrogenase / GMP reductase signature. 303 315 IPR015875 GO:0016491
Cme01g01496 494 CDD IMPDH 16 461 IPR001093 GO:0003824
Cme01g01496 494 TIGRFAM IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 16 460 IPR005990 GO:0003938|GO:0006164
Cme01g01496 494 Pfam IMP dehydrogenase / GMP reductase domain 17 484 IPR001093 GO:0003824
Cme01g01496 494 SUPERFAMILY Inosine monophosphate dehydrogenase (IMPDH) 7 493 - -
Cme01g01496 494 PIRSF IMPDH 4 494 IPR005990 GO:0003938|GO:0006164
Cme01g01496 494 Gene3D Aldolase class I 4 494 IPR013785 -
Cme01g01496 494 PANTHER INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE 1 2 494 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01496 K00088 - csv:101217193 950.273