Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01499 ATGTCTAAATTCTTCTTTCTTTTTCTTGCCCTCTTCCTCCCTGCTTTAGTCTCCGGCGGGGGGGTGTCTTGTAGCTGTGATGAATCCGATGGGGGTGCTGCCGTCAGCGCAAAAGAAGCAATGAAATACAAGGTGGGTTCGATTGGGTCGGTGCTGGTGGCCGGAGCTGCAGGGGTGAGCCTTCCTTTGGTGGGGAAGAAGATTCGGTGTCTGAGGCCAGAAAATGACATATTTTTCATGATAAAGGCTTTTGCTGCAGGGGTCATTTTGAGCACTGGCTTCATCCACATACTGCCCGATGCCTTCCAAGACTTGACCTCCCCCTGTCTGGGCCAAAATCCTTGGGGAGATTTCCCATTTGCGGGTTTCATCGCCATGGCCGCCTCCATCGCCACCTTGATGGTGGACACATTTGCAACCAGTTTTTACCAGAGACGCCACTTCAGTAAAACCAAGCAAGTAATTGCTGACCAGGAAACCGGCAATGACCATGCCGGTCACGTGCATGTTCACACTCACGCCACACATGGCCACGCTCACGGATCCGCCCCCACTCCCACCGGAGAATTGAGTCTCGCTGACTTGATCCGTTACCGGATTATATCTCAGGTTTTGGAATTGGGAATTGTGGTTCATTCGGTGATAATTGGTATTTCTCTTGGTGCATCGCTGAGCCCTGCCACCATTAAGCCACTGCTGGTAGCTCTGTCTTTCCACCAATTTTTTGAGGGAATGGGACTCGGTGGCTGCATTTCCCAGGCACAATTTAGGTGGCAATCAGCGGCAGCAATGGCGACATTTTTCTCACTGACAGCGCCTGTGGGAATTGCTGTGGGAATCGGAATCTCAGGAGTTTATAGAGACAATAGTCGGACGGCTCTGATCGTTGAAGGAAGCATGAACTCAGCATCGGCAGGGATATTGATTTACATGGCTCTTGTCGACCTTCTTGCTGCTGATTTCATGAACCCAAGGATGCAAAACAATTTGGGTCTTCAATTAGGAGCTAATATCTCTTTGCTTTTAGGGGCTGCTTGCATGTCTGTACTGGCCAAATGGGCTTAG 1065 50.33 MSKFFFLFLALFLPALVSGGGVSCSCDESDGGAAVSAKEAMKYKVGSIGSVLVAGAAGVSLPLVGKKIRCLRPENDIFFMIKAFAAGVILSTGFIHILPDAFQDLTSPCLGQNPWGDFPFAGFIAMAASIATLMVDTFATSFYQRRHFSKTKQVIADQETGNDHAGHVHVHTHATHGHAHGSAPTPTGELSLADLIRYRIISQVLELGIVVHSVIIGISLGASLSPATIKPLLVALSFHQFFEGMGLGGCISQAQFRWQSAAAMATFFSLTAPVGIAVGIGISGVYRDNSRTALIVEGSMNSASAGILIYMALVDLLAADFMNPRMQNNLGLQLGANISLLLGAACMSVLAKWA 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19719544 19722183 - MELO3C012595.2.1 Cme01g01499 318475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01499 354 Pfam ZIP Zinc transporter 43 351 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cme01g01499 354 TIGRFAM zip: ZIP zinc/iron transport family 30 354 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cme01g01499 354 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Cme01g01499 354 PANTHER ZINC/IRON TRANSPORTER 9 354 - -
Cme01g01499 354 PANTHER METAL TRANSPORT PROTEIN 9 354 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00934 Cme-Chr1:10831566 Cme01g01499 Cme-Chr1:19719544 1.18E-09 dispersed
Cme01g01499 Cme-Chr1:19719544 Cme07g00660 Cme-Chr7:5576576 4.43E-122 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01499 K14709 - csv:101216720 624.009