Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01511 ATGGCTAATGATTGTATTGGCGAGGAAGTTGAGAAGATGGTCGCTGAATTGCCCGAGGGAGGTGTATTGCTGCTTGAAAACGTGAGGTTTTACAAGGAGGAAGAGAAGAACGACCCTGAGTTTGCCAAGAAGTTGGCTTCTCTTGCAGATCTCTATGTTAACGATGCCTTTGGAACTGCTCACAGAGCCCACGCTTCCACTGAGGGTGTGGCTAAGTACTTGAAACCTTCTGTTGCTGGTTTCCTTATGCAGAAGGAACTTGACTACTTGGTCGGAGCTGTGTCTAATCCTAAGAGACCATTTGCTGCAATTGTTGGTGGTTCAAAGGTGTCTTCAAAGATTGGAGTGATTGAATCCTTGTTGGAAAAGGTTAATCTTCTTTTCCTTGGTGGAGGAATGATCTTTACCTTCTACAAGGCACAAGGACTCGCAGTGGGTAAATCACTTGTGGAAGAAGACAAGCTGGACCTTGCTACCTCGCTCATTGAGAAGGCAAAAGCCAAGGGAGTTTCTCTTTTGCTTCCAACCGACGTAGTGGTAGCAGATAAATTTGCTGCTGATGCTGACAGCAAGGTTGTGGCAGCATCAAGTATTCCAGATGGCTGGATGGGTTTGGATATTGGACCTGATTCTATCAAGAGTTTTGGTGAAGCTTTGGATTCTACCCAAACCATTATTTGGAATGGACCTATGGGAGTGTTCGAGTTTGACAAGTTTGCGGCCGGAACGGAGGCTATTGCGAAGAAGTTGGCAGAGCTGAGTGGAAAGGGAGTTACCACCATAATTGGAGGAGGCGACTCTGTTGCGGCTGTTGAGAAGGTTGGACTTGCGGATAAGATGAGCCACATCTCCACTGGTGGTGGTGCCAGTTTAGAGCTTCTTGAAGGAAAAACGCTTCCCGGCGTCAGTGCTCTTGACGATGCTTGA 927 47.14 MANDCIGEEVEKMVAELPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKVNLLFLGGGMIFTFYKAQGLAVGKSLVEEDKLDLATSLIEKAKAKGVSLLLPTDVVVADKFAADADSKVVAASSIPDGWMGLDIGPDSIKSFGEALDSTQTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVSALDDA 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19904572 19907870 - MELO3C012604.2.1 Cme01g01511 318487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01511 308 Gene3D - 94 307 IPR015824 GO:0004618|GO:0006096
Cme01g01511 308 Gene3D - 1 91 IPR015824 GO:0004618|GO:0006096
Cme01g01511 308 Pfam Phosphoglycerate kinase 2 297 IPR001576 GO:0004618|GO:0006096
Cme01g01511 308 PRINTS Phosphoglycerate kinase family signature 224 249 IPR001576 GO:0004618|GO:0006096
Cme01g01511 308 PRINTS Phosphoglycerate kinase family signature 283 300 IPR001576 GO:0004618|GO:0006096
Cme01g01511 308 PRINTS Phosphoglycerate kinase family signature 48 70 IPR001576 GO:0004618|GO:0006096
Cme01g01511 308 PRINTS Phosphoglycerate kinase family signature 20 35 IPR001576 GO:0004618|GO:0006096
Cme01g01511 308 PRINTS Phosphoglycerate kinase family signature 102 121 IPR001576 GO:0004618|GO:0006096
Cme01g01511 308 PRINTS Phosphoglycerate kinase family signature 79 101 IPR001576 GO:0004618|GO:0006096
Cme01g01511 308 PRINTS Phosphoglycerate kinase family signature 260 271 IPR001576 GO:0004618|GO:0006096
Cme01g01511 308 PANTHER PHOSPHOGLYCERATE KINASE 1 308 IPR001576 GO:0004618|GO:0006096
Cme01g01511 308 SUPERFAMILY Phosphoglycerate kinase 2 307 IPR036043 GO:0004618|GO:0006096
Cme01g01511 308 PANTHER PHOSPHOGLYCERATE KINASE, CYTOSOLIC 1 308 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01511 Cme-Chr1:19904572 Cme04g02518 Cme-Chr4:31484509 6.03E-42 dispersed
Cme01g01511 Cme-Chr1:19904572 Cme11g01630 Cme-Chr11:24175798 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01511 K00927 - csv:101215513 565.074