Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01518 ATGGCTGATACAAATTATTTTAGCGAGGAAGAAAAGCTGGAAGAAGCGAATGAAGGATTTCGAAGTGGAGTGTTCGTAGAGCTCAAAGCATATTGCTTGGAGCTGCTACAGCTTCTCCAATTTCCCAAGAAACGCTCCTCCTCAATTCATTCATTGTTCGAACTGCTTCGAAAAACACCCACAACTTCTCTGCAACATTGCTTCGATTATGTGCTGTTCCCGCTACTCCTGCTATTGGATGCAGCTGTTGTGGATAGATCTCAGCAGAAGGTTGATTCTGGAGAAAACAGTATGATGTCTGTTAGTCATGAACTGCCTCATAGAGTGAGTGACTGTGTGGCAGAAGGTGTGCTTCAGTGTCTCGAAGAACTCCTGAAGAAGTGTCGTTTAGGGTCTGTGGAGCAGATGGTTGTAGTGCTGAAAAAGTTAACATGTGGGGCTCTGTTATCTCCCCTTGAGGCATCAGAAGAATTCCGTGAAGGAATTATCAAGTGTTTCAAGGCAATCTTTATGAATTTATACCCCTGCCCAAATGATGCATGCTCATGTAAACAAATATCTGGTTCTCCAGCACTTGCAGAAAACAGAGAATTTCAAGGTCATCTTGATGTGCTTTCAGAAGAGTCAAAGCCAAATGAATGCCTGCTTGAATTTCTCCGGAGTGAAACTGCTTCAGCTGCTGTTGGACACTGGCTGTCACTTCTTCTCAAAGCTGCAGATATTGAGGCCGCACGGGGACATCATGGAAGTTCCAAACTTCGTATTGAAGCCTTTATGACCCTTCGCATACTTGTGGCAAAGGTTGGAACAGCTGATGCATTGGCCTTCTTCTTGCCTGGTGTTGTCAGTCAGTTTTCTAAAGTTTTGCGGGCCTCTAAAACAACATTAAGTGGGGCTGCTGGGAATACAGAAGCCACAAACCAAGCAATTAGAGGCTTGGCTGAATATCTAATGATAGTCCTCGAGGATGATGCTAATAAATCTAGCCTTGTCATGTTTATGGATTTTCAGTCAGAAATTATTATGGAGAAGGGTAAAAAGGCACAATATATTCTAGAGGAACTTCGTCAATTGCCTAATAAAGTCCGCGGTGGGAGTATAATGGTAGAAGAATGTTCATCTGCCGAGGTGGCAAAGAAAACTACTTATGAATCAGGATCAAAGGAGAAGATGAGTGCTGACTATCTCAAGGGGAACAATTCTTTTCATGTGGATCGTACGAAGGAATGGGTTGCACAAACTTCAACTCATGTGGATAAACTATTAAGGGCAACTTTTCCATATATTTGTTTGCATCTGGTAAAAAAGGTTAGACTGGGCATCCTGGCTGCCATAAAAGGTCTATTGTCAAGGTGCAGCTGTACACTAAAGGAGAGTAGATCCATGCTTTTGGAGTGCTTGTGTACTTTGGCTATTGATGAATCTGAGGATGTTTCATTCACTGCACAAGAATTCCTCGAATATTTATTCGGGATAACTGGGAACCATCAATTGCAGCATGACATTGCCAAAATTTTTGTGAGGTTGGTTGAAAAGCTTCCTAATGTGGTTCTTGGAACTGATGAGAAGTTTGCTCTATCACATGCACGACAGTTACTTGTAGTGGCGTATTATTCTGGGCCCCAGCTCATTATCGATCATCTTATCCACTCTCCAGTAACTGCAGTTCGATTTCTAGATGTATTTGCTGTTTGTCTAAATCAGAATTCAGTCTACGCCTGTTCTATTGGAAAATTTCTCTCAGCAAGGCCATCCTCTCTAGGATATCTGCACTCTCTTACTGAGTTAAAGGTTGGAACTAATTTCATCAGTGATTGCATTTCCATCATGAATACTGCCTCACCTGCAGTTTCGGAGCTCACAATGGTTCAGAAGAAAGATATGCAGCAACGTAATCACGTGCTTCCTCGCATGCCCCCATGGTTTAATGGCATTGGCAATCAGAAACTTTATGAAGCTCTTGGAGGAGTTCTCCGACTCGTTGGTTTGTCTTTGGCATCAGATAGCAAAGGTGAAGGTAGTTTGTCGGTTACCATTGATATCCCGCTGGGAAACTTGCAAAAACTGGTTTCTGAGCTTCGTAAGAACGAATACAGTGAAGAAAACTGGGAATATTGGTACAGGAGGACAGGTTCAGGACAGTTAGTGCGCCAGGCAAGCACTGCTGTATGTATTCTGAATGAGATGATATTTGGTGTTTCAGAATATTCAGTAGATTACTTTTCAAGTACATTTCAGAGAGCAAGAATGCACAGGAAGGTTACCAGTGACTACGAATCTGTCACCACTAATGAAGCTAGTTGGAAAGTTCCCCTGGAGAAAGTTAGAGCACAGTTAATTGATTGTATTGGTAGAGTCCTGCATGAATACCTCTCTCCTGAGATATGGGACCTTCCTACACAACATAAGTCTTCCCCGATGCATTCTGCTGGTGAAGATGACATTAGCTTACACTTCTTCAGAGACACTGCTATGTTGCATCAGAATCTTATTTCCTCAAATGCGGAAGTTAGAAGCACCTCCGATGCTATCTTACACGTTCTTTCTTCTTCATCTGGCTACCCAACGGTTCGGAACTTGGTTTTGGAAAATGCAGATTATGTGATTGATTCAATTTGTAGGCAGTTGCGTCATTTGGATCTCAATTCGCACGTGCCAAATGTTCTTGCCGCTATTCTTTCCTATATTGGAATAGCTCATGAGATTTTGCCTCTACTGGAGGAACCTATGCATAAAGTATCATCGGAACTTGAGATTCTTGGAAGACATCAGCACCCTAATCTAACTGGTCCATTCTTAAAGGCAGTAGCAGAGATTGCCAGAGTGTCAAAGCACGAATCTAATTCCCTGCCTAGTAAAGCAGCATCATATACTAGTCATGTCAAGTCTTTAATTTCTAACGGGGAAAAGCAGGCAGGAGGGGTATCGAGATCATGTCATGATGATGACATAAATATATCTTCACTGGAATCAGAATGGGAAAATATTTTGTTCAAGCTCAATGATTCCAGAAGATATAGACGAACAGTTGGATCAATTGCTGGTTCGTGCATTGTGACTGCTATACCTCTCCTAGCTTCACAGAATCAAGCTACATGCTTCGTGGCCTTGGATATTGTTGAGTATGGCGTCGCAGCCTTGGCAAAAGTGGAAGAAGCCTATAAGCATGAGAAGGATATCAAGGAAGCAATTGAGGAAACATTGCACTCACATTCCTTTTATCGACTTCTGGACACTTTGGATGTTTCTGAGGAGGCGTCAGATGAGAATCGATTGCTTCCTGCAATGAATAAAATATGGCCCTTTTTGGTTGCTTGCATTCAGAACAAAAATCCAGTGGTGGCACGAAGATGTTTAAACGTGATAAGCAGTTCAGTACAAATCTGTGGAGGAGATTTCTTCACACGACGTTTCCATACAGATGGATCTCATTTTTGGAAGCTTCTGACGTCGTCTCCATTTATAAGGAAACAAAAGGTGAGAGAAGAGAAGGCAGTGCTGCAACTTCCCTATCGAAACACATCTATATCTTCAGAAGACTCGGTTGCTGAAGGTTCCAATTTGAAAGTTCAGGTCGCACTGCTCAATATGATTGCTGATCTATCTAGAAACAGAAGAAGTGCATCGGCATTGGAAGTAGTTCTGAAGAAGGTCAGTGGCCTTGTAGCAGGTGTAGCCTTTAGTGGTGTTGTGGGGCTTAGGGAAGCATCTTTGAATGCGCTTGGAGGACTTGCATCTATGGATCCTGACCTTATTTGGCTTCTTGTCGCTGATGTATACTACTCCATAAAGAAGGACGTGCCTTTGCCACCCACATCAGAATTTCCTGAGGTATCTCGACTTCTTCCACCACCTTTATCTCCAAAAGGGTATCTTTATGTGCTTTATGGGGGTCAAAGTTATGGTTTTGACATAGAAATTTCGTCTGTTGAAATTGTATTTAAGAAATTGCAATCCAACATTTTTACGTGTTAA 3975 42.26 MADTNYFSEEEKLEEANEGFRSGVFVELKAYCLELLQLLQFPKKRSSSIHSLFELLRKTPTTSLQHCFDYVLFPLLLLLDAAVVDRSQQKVDSGENSMMSVSHELPHRVSDCVAEGVLQCLEELLKKCRLGSVEQMVVVLKKLTCGALLSPLEASEEFREGIIKCFKAIFMNLYPCPNDACSCKQISGSPALAENREFQGHLDVLSEESKPNECLLEFLRSETASAAVGHWLSLLLKAADIEAARGHHGSSKLRIEAFMTLRILVAKVGTADALAFFLPGVVSQFSKVLRASKTTLSGAAGNTEATNQAIRGLAEYLMIVLEDDANKSSLVMFMDFQSEIIMEKGKKAQYILEELRQLPNKVRGGSIMVEECSSAEVAKKTTYESGSKEKMSADYLKGNNSFHVDRTKEWVAQTSTHVDKLLRATFPYICLHLVKKVRLGILAAIKGLLSRCSCTLKESRSMLLECLCTLAIDESEDVSFTAQEFLEYLFGITGNHQLQHDIAKIFVRLVEKLPNVVLGTDEKFALSHARQLLVVAYYSGPQLIIDHLIHSPVTAVRFLDVFAVCLNQNSVYACSIGKFLSARPSSLGYLHSLTELKVGTNFISDCISIMNTASPAVSELTMVQKKDMQQRNHVLPRMPPWFNGIGNQKLYEALGGVLRLVGLSLASDSKGEGSLSVTIDIPLGNLQKLVSELRKNEYSEENWEYWYRRTGSGQLVRQASTAVCILNEMIFGVSEYSVDYFSSTFQRARMHRKVTSDYESVTTNEASWKVPLEKVRAQLIDCIGRVLHEYLSPEIWDLPTQHKSSPMHSAGEDDISLHFFRDTAMLHQNLISSNAEVRSTSDAILHVLSSSSGYPTVRNLVLENADYVIDSICRQLRHLDLNSHVPNVLAAILSYIGIAHEILPLLEEPMHKVSSELEILGRHQHPNLTGPFLKAVAEIARVSKHESNSLPSKAASYTSHVKSLISNGEKQAGGVSRSCHDDDINISSLESEWENILFKLNDSRRYRRTVGSIAGSCIVTAIPLLASQNQATCFVALDIVEYGVAALAKVEEAYKHEKDIKEAIEETLHSHSFYRLLDTLDVSEEASDENRLLPAMNKIWPFLVACIQNKNPVVARRCLNVISSSVQICGGDFFTRRFHTDGSHFWKLLTSSPFIRKQKVREEKAVLQLPYRNTSISSEDSVAEGSNLKVQVALLNMIADLSRNRRSASALEVVLKKVSGLVAGVAFSGVVGLREASLNALGGLASMDPDLIWLLVADVYYSIKKDVPLPPTSEFPEVSRLLPPPLSPKGYLYVLYGGQSYGFDIEISSVEIVFKKLQSNIFTC 1324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19976582 19988962 - MELO3C012612.2.1 Cme01g01518 318494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01518 1324 SUPERFAMILY ARM repeat 437 1252 IPR016024 -
Cme01g01518 1324 PANTHER TEL2 INTERACTING PROTEIN 1 TTI1 FAMILY MEMBER 21 1322 - -
Cme01g01518 1324 Coils Coil 1047 1067 - -
Cme01g01518 1324 SUPERFAMILY ARM repeat 41 514 IPR016024 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01518 Cme-Chr1:19976582 Cme03g00260 Cme-Chr3:3316906 6.89E-116 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01518 K20403 - csv:101212708 2447.54