Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01521 ATGAGGAAGAAACGTAACGAGAAACACAAGATAATTTTACCGCCGGATCTTCCACCAGAGGTTACCGAGGAAGAAATTGAGGTTTCCGATGAGGACTTGGAGTTCCTTAAGGAGAACCAAGACTATGCCGCCTCTGTTTTCCGTCTAGACACTAAATCCATAACCAAGCATGTTAAGCGGGTTGCTAATGTTGAAGAAGATGCTCTGGAGGTTTTATATGAGAAGCGTCTGCGCAAGAAGCCAGTGGAGAAACAGGAGGAGGGAAATGAGCTCCAAGTTGATCCCGTGGATGCTCTTCCTGTCAAAACACTTGATGGGAAACTCTACTACCGGAGATCAAAACTATCCGATGCACCTGAAAATGGTGGGAATGAGGAGGCAATGGAAGAAGACCAGGTAGATAATGGTGTATTGAAGTTAACTAAAGCAGAAAGGAGAGCAAAGCAAAAGAAAATTAAGAAGATTTCCAAGAAACAAGAGGATGTAACCCAAGCTGAAGAAGTTCAACCAACCTCACAAGCTGCTGTTTTGGCCGAAGTGGTAGAAGACCTTACTGCTGAAAAGACATTTGAAAGTAAGAAGCAGAAACTTGCGGAGCTTGGAATTGGGTTGCTAGCAGACCCAAATTCCAATATTAAATCTCTGAAGGAGATGCTGCAGATTGCTAAGGATAATGATCAAGCAATTGTGAAACTTGGACTTCTATCATTATTGGCTGTTTTTAAAGACATTATACCTGGTTACCGGATTCGGCTTCCAACAGAAAAGGAGCTAGAAATTAAAGTGTCCAAGGATGTCAAGAAAATGCGATACTATGAGTCTACTCTTCTTACTGTTTATAAGGGATACCTGCAGAAGCTGATGTCATTAGAAAAATTGCCATCATTTCAGCATGTTGTTATTCGCTGTATATGTACATTGCTTGAGGCAGTTCCCCATTTCAACTTTCGAGAGACATTGTTAGGAGTCGTTGTTAAAAACATAAGCTCCCCTGATGACATTGTAAGAAAACTTTGTTGTGGTGCTATTCAATCTTTATTTATCAATGAGGGAAAGCATGGTGGTGAAGCGACCGTGGAGGCTGTCCGGTTGATTGCTGATCATGTGAAATATCACGACTGCCAATTGCATCCTGATTCCATCCAGCCTTTTGTACATCTAATGTTTGACGAGGATCTGAGGAAAGCAGAAAAGCAAGACGATCATAGTAAAGTAAAGAACAAAAAACACAGGAAAATAAAGAATCGTGAGGAACCAAGTCATTTGCAAGGGAATGATGGAAGACAGAGTATGAGGACGAAGTTTACTGAAGAGGTTGTTGCTGATTACAGGTCTGCTTCTCTTGCTCCAGATGTAATGAAGCAAAGAGAGATGCAGTCAGATACACTTTCTGCTGTATTTGAAACATATTTCCGAATCTTAAGACATACAATGCAGTCATTAACTGCTGGGCCTGAAGCAAGTAGTGCTCCATCTACTACTAGCCCATCTGGATCCCATCCTCTGCTTGCTCCATGTTTGAATGGGTTGGGAAAATTCTCGCATCTCATCGATATGGATTTCATGGGAGATCTTATGAATTATTTAAAAAGGCTTGCTTCTGGTGGGGACCATTCTTCTGAGAAACAGTCGCGATGTTTGACTGTGTCTGAGCGTCTTCAGTGCTGCATTGTGGCATTTAAAGTAATGAGGAAAAATCTTGATGCTTTGAATGTTGATCTTCAGGATTTCTTTGTCCAGCTATACAATATTGTACTTGATTACAGGCCTGGGAGGGATCAAGGTGGATTGTTAGCTGAAGCTTTGAAGATAATGTTGTGCGATGATAGACAGCATGACATGCAAAAGGCAGCTGCATTTATTAAGCGTTTGGCTACTTTCTCATTATGTTTTGGATCTGCAGAGTCGTTGGCAGCCTTGGTCACCGTAAGGCATCTTCTTCTGAAAAATGTCAAGTGCCGGAACCTTTTGGAAAACGACGCTGGTGGAGGTTCTGTGTCAGGCTCTATAGCGAAATATCAGCCATATGCAACTGATCCAAATTTGAGCGGCGCTCTTGCTTCAGTTCTTTGGGAACTTGATCTTCTTTGGAAGCATTATCACCCAGCTGTCTCAAAGATGGCTGCTAGTATATCGAACATGAATAGTGCTCAAAATCAAGTATATATCTCCACTGTTTCTCCCCAACAAGCATTCAAAGACTTGTCGCTGGAACAAGAGTCCTTCAACCCACAATTTAACACCCGAAAAATTAGCAAGAGAAAGAGAGCTTCAGAATCTTCCCAGTCTACTCCCAATACGTGTGGCACTATCGACGAAAATGAAGTGAAGGAAAAACTCTCAACAAGATTCTTTCTTCTCCGGGACATCAAGGACAATGAAAGGTTGAGATCTGAATTAGAGCGCACCACTTTGTCTTTACAGCTATATGAAGAATACAAAAGGCAAAAGAGAAAAACTAAAAAGTCTAGGAATGTTTAG 2481 41.56 MRKKRNEKHKIILPPDLPPEVTEEEIEVSDEDLEFLKENQDYAASVFRLDTKSITKHVKRVANVEEDALEVLYEKRLRKKPVEKQEEGNELQVDPVDALPVKTLDGKLYYRRSKLSDAPENGGNEEAMEEDQVDNGVLKLTKAERRAKQKKIKKISKKQEDVTQAEEVQPTSQAAVLAEVVEDLTAEKTFESKKQKLAELGIGLLADPNSNIKSLKEMLQIAKDNDQAIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEIKVSKDVKKMRYYESTLLTVYKGYLQKLMSLEKLPSFQHVVIRCICTLLEAVPHFNFRETLLGVVVKNISSPDDIVRKLCCGAIQSLFINEGKHGGEATVEAVRLIADHVKYHDCQLHPDSIQPFVHLMFDEDLRKAEKQDDHSKVKNKKHRKIKNREEPSHLQGNDGRQSMRTKFTEEVVADYRSASLAPDVMKQREMQSDTLSAVFETYFRILRHTMQSLTAGPEASSAPSTTSPSGSHPLLAPCLNGLGKFSHLIDMDFMGDLMNYLKRLASGGDHSSEKQSRCLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNIVLDYRPGRDQGGLLAEALKIMLCDDRQHDMQKAAAFIKRLATFSLCFGSAESLAALVTVRHLLLKNVKCRNLLENDAGGGSVSGSIAKYQPYATDPNLSGALASVLWELDLLWKHYHPAVSKMAASISNMNSAQNQVYISTVSPQQAFKDLSLEQESFNPQFNTRKISKRKRASESSQSTPNTCGTIDENEVKEKLSTRFFLLRDIKDNERLRSELERTTLSLQLYEEYKRQKRKTKKSRNV 826
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20160230 20169040 + MELO3C012616.2.1 Cme01g01521 318497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01521 826 MobiDBLite consensus disorder prediction 749 773 - -
Cme01g01521 826 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 4 771 IPR016903 -
Cme01g01521 826 MobiDBLite consensus disorder prediction 396 429 - -
Cme01g01521 826 Pfam CBF/Mak21 family 553 708 IPR005612 -
Cme01g01521 826 SUPERFAMILY ARM repeat 214 592 IPR016024 -
Cme01g01521 826 MobiDBLite consensus disorder prediction 1 22 - -
Cme01g01521 826 Coils Coil 138 160 - -
Cme01g01521 826 Pfam Nucleolar complex-associated protein 193 283 IPR011501 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01521 K14834 - csv:101213821 1503.8