Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01853 ATGGCTGGTAAAGGAGAAAGTCCGGCGATCAGAATCGATCTTGGAACCACGTACTCTTGCGTCGATGTGTGGCAACATGATCGAGTTGAGATCATTGCCAACGATCAGGGCAACAGGACGACGTCGTCGTATGTTGCTTTCACCGACTCTGAGCGCTTGATCGGTGATGCAGCTAAGAATCAGGTCGCCATGAACCCGATTAACACCGTTTTTGATGCTAAGCGTTTAATTTGCCAAAGATTTAGCGATCCATCGGTCCATAGTGATATCAAGCTCTGGCTGTTTAAAGTTATTGCCGGTCCTAGCGATAAGCCAATGATTGTTGTAAACTACAAGGGTGAAGAGAAGCAGTTCTCTGCTGAAGAAATCTCTTCTATGGTGCTCATAAAGATGAAGGAGATTGCTGAGGCGTATCTCGACACAACAGTGAAGAATGTCATCGTCACTATCCCGACTTACTTCAACGATTCTCAGAGACAGGCCACCAAGGATGCTGGTGTCATTTCCGGCCTAAATGTGATGCGTATTATCAATGAACCAACAGCTGCCGCCATTGCTTATGGTCTTGACAAGAAGTCGAGCAGCTCTAACACAAATAATTGTTAA 606 45.71 MAGKGESPAIRIDLGTTYSCVDVWQHDRVEIIANDQGNRTTSSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLICQRFSDPSVHSDIKLWLFKVIAGPSDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAYLDTTVKNVIVTIPTYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKSSSSNTNNC 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26292422 26297729 - MELO3C021100.2.1 Cme01g01853 318829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01853 201 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Cme01g01853 201 SUPERFAMILY Actin-like ATPase domain 9 191 IPR043129 -
Cme01g01853 201 PANTHER 70 KDA HEAT SHOCK PROTEIN 1 199 - -
Cme01g01853 201 Pfam Hsp70 protein 10 195 IPR013126 GO:0005524|GO:0140662
Cme01g01853 201 PRINTS 70kDa heat shock protein signature 8 21 - -
Cme01g01853 201 PRINTS 70kDa heat shock protein signature 36 48 - -
Cme01g01853 201 PRINTS 70kDa heat shock protein signature 58 66 - -
Cme01g01853 201 PRINTS 70kDa heat shock protein signature 146 166 - -
Cme01g01853 201 PANTHER HEAT SHOCK PROTEIN 70KDA 1 199 IPR013126 GO:0005524|GO:0140662
Cme01g01853 201 Gene3D - 3 201 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01853 Cme-Chr1:26292422 Cme09g00519 Cme-Chr9:4992540 2.54E-128 dispersed
Cme01g01852 Cme-Chr1:26292307 Cme01g01853 Cme-Chr1:26292422 2.01E-48 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01853 K03283 - cmo:103497606 399.053