Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme01g01979 | ATGACCAGGTTGACTGCGAGGGTTCAAAAGGTAAGAGATGAGCTCGAACAATTACTGGACGACGACGATGATATGGCAGACCTTTACTTGTCAAGAAAGATGAGCTCATCTTCTCCTGTAAGTGGTTCTGGTCCTGCCAATTGGTTTCCCGCCTCTCCTACCATTGGTTCAAAGATCTCGAGAGCAAGCAGAGCAAGTGTTGCAACTGTACGTGGGGACGAGGATGACATCGAGGAACTTGAAATGCTGCTGGAGGCTTACTTTATGCAAATTGATGGTACATTGAACAAATTAACTACAGTAAGTTCACCTGTTCCCTGCTTATCTAATTTATGA | 336 | 44.64 | MTRLTARVQKVRDELEQLLDDDDDMADLYLSRKMSSSSPVSGSGPANWFPASPTIGSKISRASRASVATVRGDEDDIEELEMLLEAYFMQIDGTLNKLTTVSSPVPCLSNL | 111 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 28231669 | 28232867 | - | MELO3C028495.2.1 | Cme01g01979 | 318955 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme01g01979 | 111 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 1 | 101 | IPR039204 | - | |
| Cme01g01979 | 111 | Gene3D | Magnesium transport protein CorA, transmembrane region | 1 | 107 | - | - | |
| Cme01g01979 | 111 | Coils | Coil | 1 | 21 | - | - | |
| Cme01g01979 | 111 | PANTHER | MAGNESIUM TRANSPORTER MRS2-I | 1 | 101 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme01g01979 | Cme-Chr1:28231669 | Cme05g00459 | Cme-Chr5:4198967 | 2.16E-29 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme01g01979 | K16075 | - | csv:101203841 | 156.762 |