Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme01g02233 | ATGTCTTCCGATTCTCATGCCCCTACTCCAAGGGGTCTTCTCTGTAATGCTGGAGCTGGTGCTGCTGCTGGTGTTCTTGCTGCTACGTTTGTGTGCCCTTTGGATGTTATCAAGACTAGATTTCAGGTTCATGGACTGCCAAACATCGGTAAAGGGAGTCTTATAGTTGGCAGTCTGCAACAAATTTTTCATAAGGAGGGGCTACGTGGAATGTATAGAGGTCTTGCACCTACGGTGCTTGCATTACTGCCTAACTGGGCTGTTTATTTCACAATATATGGGCAGCTTAAAACCTTTCTTGGCTCTGATGACGAACATTGTCAGCTTTCAATAGGTGCTAATATGATGGCTGCTTCTGGTGCTGGGGCTGCTACAACTATTGCAACCAATCCTCTATGGGTAGTCAAGACCAGGCTTCAGACACAGGGAATGAAATCTGGTGTGCTACCATATAGAAATACAGTGTCTGCCTTAAAGAGAATAGCATCTGAAGAAGGCATTCGTGGATTGTACAGGTTTGCTCTTTATTATTATGTTGCTATTCTCATCAATGTATTTTATATGGAGAAGAGCATTATAAGGATATTTTACTCAACTCTAACATTCGATACCGTGTTCTGCAGTGGTCTTGTGCCTGCTTTGGCCGGTGTAAGTCACGTTGCAATTCAGTTTCCAACATATGAAAAAATTAAAAGTTATTTGGCTAGTAGAGACAATACGACAACGGACAAACTCACTGCACGTGATGTTGCGGTTGCCTCATCTGTCTCCAAGATATTTGCTTCCACGTTGACCTATCCACATGAGGTTGTACGATCCAGGCTTCAGGAACAGGGGTTTCACTCCGAAAAGCGTTATTCAGGCGTAGCTGATTGCGTAAAGAAAGTATTTCAGCAAGATGGTCTCCCTGGTTTCTATCGAGGGTGTGCAACCAACCTTCTCAGGACAACGCCTGCTGCTGTCATCACATTTACGAGCTTTGAAATGATTCACCGATTTCTTGTCAACTTATTTCCTCCCGATCCACATCCACACACATTATGA | 1044 | 43.77 | MSSDSHAPTPRGLLCNAGAGAAAGVLAATFVCPLDVIKTRFQVHGLPNIGKGSLIVGSLQQIFHKEGLRGMYRGLAPTVLALLPNWAVYFTIYGQLKTFLGSDDEHCQLSIGANMMAASGAGAATTIATNPLWVVKTRLQTQGMKSGVLPYRNTVSALKRIASEEGIRGLYRFALYYYVAILINVFYMEKSIIRIFYSTLTFDTVFCSGLVPALAGVSHVAIQFPTYEKIKSYLASRDNTTTDKLTARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGFHSEKRYSGVADCVKKVFQQDGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVNLFPPDPHPHTL | 347 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 31013632 | 31017023 | + | MELO3C015958.2.1 | Cme01g02233 | 319209 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme01g02233 | 347 | Gene3D | Mitochondrial carrier domain | 190 | 337 | IPR023395 | - | |
Cme01g02233 | 347 | Gene3D | Mitochondrial carrier domain | 1 | 189 | IPR023395 | - | |
Cme01g02233 | 347 | PANTHER | NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC | 1 | 172 | - | - | |
Cme01g02233 | 347 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 11 | 99 | IPR018108 | - | |
Cme01g02233 | 347 | Pfam | Mitochondrial carrier protein | 15 | 102 | IPR018108 | - | |
Cme01g02233 | 347 | Pfam | Mitochondrial carrier protein | 109 | 172 | IPR018108 | - | |
Cme01g02233 | 347 | Pfam | Mitochondrial carrier protein | 251 | 335 | IPR018108 | - | |
Cme01g02233 | 347 | PANTHER | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED | 1 | 172 | IPR044712 | GO:0006862|GO:0055085 | |
Cme01g02233 | 347 | PRINTS | Mitochondrial carrier protein signature | 16 | 29 | IPR002067 | GO:0055085 | |
Cme01g02233 | 347 | PRINTS | Mitochondrial carrier protein signature | 29 | 43 | IPR002067 | GO:0055085 | |
Cme01g02233 | 347 | PRINTS | Mitochondrial carrier protein signature | 74 | 94 | IPR002067 | GO:0055085 | |
Cme01g02233 | 347 | PRINTS | Mitochondrial carrier protein signature | 254 | 276 | IPR002067 | GO:0055085 | |
Cme01g02233 | 347 | PRINTS | Mitochondrial carrier protein signature | 124 | 142 | IPR002067 | GO:0055085 | |
Cme01g02233 | 347 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 245 | 333 | IPR018108 | - | |
Cme01g02233 | 347 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 109 | 203 | IPR018108 | - | |
Cme01g02233 | 347 | PANTHER | NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC | 207 | 346 | - | - | |
Cme01g02233 | 347 | SUPERFAMILY | Mitochondrial carrier | 207 | 329 | IPR023395 | - | |
Cme01g02233 | 347 | PANTHER | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED | 207 | 346 | IPR044712 | GO:0006862|GO:0055085 | |
Cme01g02233 | 347 | SUPERFAMILY | Mitochondrial carrier | 13 | 175 | IPR023395 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g02233 | Cme-Chr1:31013632 | Cme09g01426 | Cme-Chr9:19462240 | 1.45E-109 | dispersed | |
Cme04g01083 | Cme-Chr4:14812778 | Cme01g02233 | Cme-Chr1:31013632 | 2.37E-17 | dispersed | |
Cme01g02233 | Cme-Chr1:31013632 | Cme10g00935 | Cme-Chr10:6996882 | 1.01E-07 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme01g02233 | K15115 | - | csv:101204681 | 574.704 |