Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02339 ATGGCTGGTGCTATCAAGGTTCATGGAATCCCCACTTCCACAGCCACTGGTAGGGTTCTTGCTGCCCTTTACGAGAAGGGTCTTCAATTCGAGCTTGTGAATGTCAAATTACACGAAGGAGAACACAAGCGAGAGCCCTTTCTCTCGTTGAATCCCTTTGGTCAAGTTCCTGCATTCCAAGATGGAGATCTGAATCTTTTTGAATCAAGAGCGATCACACAATACATCTCTGGAAATTACGCCAGTAATGGAACCCAGTTGATTCCTCAAGATCCCAAGAAAGCAGCTGTTGTATTAACATGGATTGAAGTAGAGAGCCACCATTTTGACCCAGTAGCCATGAAACTAGTGTTCGAGCTTTGCTTAAAACCAGTTTTTGGGTGGGGTGATGCCGATCCTGCAGTTGTTGCGCAAAGCGAAACTGAATTAGGCAAAGTTCTTGACATCTATGAGAAAAGACTGTCTGAATCCAAATACTTAGGAGGTGAGTCCTTCAGTTTGGCTGATCTACACCATCTCCCTGTTTTGGGCTACCTGTTGGCCACACAATCCAAGAAACTGTTTGAATCTCGACCCCATGTCAATGCTTGGGTAGCTGATATCATAGCCAGGCCATCCTGGGCTAAAGTTCTTGAACTTCGCAAGTAA 648 45.22 MAGAIKVHGIPTSTATGRVLAALYEKGLQFELVNVKLHEGEHKREPFLSLNPFGQVPAFQDGDLNLFESRAITQYISGNYASNGTQLIPQDPKKAAVVLTWIEVESHHFDPVAMKLVFELCLKPVFGWGDADPAVVAQSETELGKVLDIYEKRLSESKYLGGESFSLADLHHLPVLGYLLATQSKKLFESRPHVNAWVADIIARPSWAKVLELRK 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31744298 31745584 - MELO3C016031.2.1 Cme01g02339 319315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02339 215 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Cme01g02339 215 Gene3D - 91 215 - -
Cme01g02339 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 215 - -
Cme01g02339 215 SUPERFAMILY GST C-terminal domain-like 75 214 IPR036282 -
Cme01g02339 215 CDD GST_N_Phi 4 77 - -
Cme01g02339 215 CDD GST_C_Phi 93 211 IPR034347 -
Cme01g02339 215 Pfam Glutathione S-transferase, C-terminal domain 111 205 IPR004046 -
Cme01g02339 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 215 IPR010987 -
Cme01g02339 215 SFLD Glutathione Transferase (cytosolic) 4 213 IPR040079 -
Cme01g02339 215 SFLD Main.5: Phi-like 4 213 - -
Cme01g02339 215 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 3 215 - -
Cme01g02339 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Cme01g02339 215 SUPERFAMILY Thioredoxin-like 5 89 IPR036249 -
Cme01g02339 215 Gene3D Glutaredoxin 3 88 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02339 Cme-Chr1:31744298 Cme01g02341 Cme-Chr1:31751251 3.63E-107 dispersed
Cme10g01287 Cme-Chr10:13854391 Cme01g02339 Cme-Chr1:31744298 5.11E-08 dispersed
Cme01g02339 Cme-Chr1:31744298 Cme01g02340 Cme-Chr1:31749158 1.53E-123 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02339 K00799 - csv:101212291 424.476