Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02340 ATGGCCGGCATCAAGGTCCATGGACTCGCCCTTTCCACACCCACATGCAGGGTTTTAGCTTGTCTCTACGAGAAAGACCTCGAGTTCGAGTTTATCAATGTCAAATTGCACGAAGGCGAGCATAAGAAACCCAATTTTCTCTCCATCAATCCTTTTGGTCAAATTCCTGGGTTCCAAGATGGGGATTTAACACTTTTTGAATCTAGAGCAATCACACAATACATCTCCGCAAATTATGCTAATAATGGAACTCGATTGATTCCCCAAGACGTCAAAGAAGCAGCTGCATTATTAACATGGATTGAAGTGGAGAGTCATCATTTTGATCCACTAGCCTCTAAACTTGTGTATGAGCTCTGTTTGAAGCCAAAGCTTGGATGGGGTGAGACAGATGGTGCAGTGGTTGAGCAAAAGGAAGCTGAGTTAGCCAAAGTTCTCGATATCTATGAGAAAAGGCTGACTGAATCCAAGTACTTGGCTGGGGAAGCCTTCAGTTTGGCTGATCTTCACCATATTTCAACGTTAGGGTTCTTGTTGGAGACGCAAACCAAGAAATTGTTTGAAGCTCGGCCCCATGTCAATGCTTGGGTGGCTGATATCATGGCCAGGCCGGCTTGGGCTAAGGTGCTTGCTTTGCGTAAGTGA 645 45.27 MAGIKVHGLALSTPTCRVLACLYEKDLEFEFINVKLHEGEHKKPNFLSINPFGQIPGFQDGDLTLFESRAITQYISANYANNGTRLIPQDVKEAAALLTWIEVESHHFDPLASKLVYELCLKPKLGWGETDGAVVEQKEAELAKVLDIYEKRLTESKYLAGEAFSLADLHHISTLGFLLETQTKKLFEARPHVNAWVADIMARPAWAKVLALRK 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31749158 31750663 + MELO3C016032.2.1 Cme01g02340 319316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02340 214 CDD GST_C_Phi 92 210 IPR034347 -
Cme01g02340 214 SFLD Main.5: Phi-like 1 212 - -
Cme01g02340 214 Gene3D - 90 214 - -
Cme01g02340 214 SUPERFAMILY GST C-terminal domain-like 74 213 IPR036282 -
Cme01g02340 214 SUPERFAMILY Thioredoxin-like 2 88 IPR036249 -
Cme01g02340 214 SFLD Main (cytGST) 1 212 - -
Cme01g02340 214 Pfam Glutathione S-transferase, C-terminal domain 110 204 IPR004046 -
Cme01g02340 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 4 214 - -
Cme01g02340 214 Pfam Glutathione S-transferase, N-terminal domain 14 76 IPR004045 -
Cme01g02340 214 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 4 214 - -
Cme01g02340 214 CDD GST_N_Phi 4 78 - -
Cme01g02340 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Cme01g02340 214 Gene3D Glutaredoxin 2 87 - -
Cme01g02340 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 214 IPR010987 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02340 Cme-Chr1:31749158 Cme01g02342 Cme-Chr1:31757729 7.56E-62 dispersed
Cme01g02339 Cme-Chr1:31744298 Cme01g02340 Cme-Chr1:31749158 1.53E-123 tandem
Cme01g02340 Cme-Chr1:31749158 Cme01g02341 Cme-Chr1:31751251 1.04E-102 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02340 K00799 - csv:101212536 400.593