Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02347 ATGGCCCGCGAAGTTGAAATAACAGACGATCTGAAAGTTCTCTCATTGCCAAAACTACGCCGTTTCGACTCTTTAGACATTGAATCGAACAACCTCGACGGCCACCGTGGGAACCGAGCTGCGGCCGGGTGGTGGGTGACTCTGCAATTGGCGTTTCAGAGCATTGGAATAGTGTACGGAGACATCGGGACGTCTCCGTTGTACGTTTTTCAGAGCAGTTTTCCGGTGGGGATTAAACATAAGGACGACGTTTTGGGAGTGTTGTCGTTGATTTATTATACACTCACTTTGATTCCTTTGGTTAAGTACGTCTTCATCGTCTTGCAAGCTAACGACAATGGCGACGGAGGAACATTTGCAATGTATTCTCTACTTTGCCGATATGCCAAAGTAGGGTTAATACCTAGCCAACAAGCCGAGGACGAGGAGGTTTCTAATTACGAATTGGACATTCCCAACAACCGTGTGCGGCGGGCGTCATGGTTGAAATCGCAACTCGAGAACCGTCGCTCCGCGAAACTTTTCTTGCTCTTTGCAACCATGCTTGGCACCTCCATGGTCATCGGTGATGGGGTTCTCACTCCTTGCATTTCGGTTTTGTCAGCTGTTGGAGGCATTAGAATTGCTATATCTTCAATAACACAAGATACAATAGTGGGGATATCAGCTGGGATATTAGTGTGTCTTTTCATGGCTCAAAGATTTGGAACAGACAAAGTTGGCTACACATTTGCTCCAATTATATGCATTTGGTTCATTTTCATTGCTGCCATTGGCTTCTACAATTTTGTCAACTATGATCCTTCAGTCGTTACGGCTTTAAACCCTAAATATATTATTGACTATTTTAGAAGAAACAAAACCGAAGCTTGGATTTCCCTTGGTGGCATTGTTCTCTCTATAACAGGGACAGAAGCATTATTTGCTGATGTTGGGCATTTCAGTGTGAGATCAATTCAAATAAGTATGTGTGCGGTTACATATCCAGCTTTATTGCTTGCTTACACAGGACAAGCCTCTTATCTTCGTATACACATTGATGATGTTGGAGATACCTTCTTTAAATCCATTCCAGATCCTTTATACTATCCAATGTTTGTGGTGGCTGTATTATCAACCATTATTGCAAGTCAAGCTATGATTTCAGGAACATTCTCTATAATTCAACAATCTCTTTCACTTGGGTGTTTTCCAAGAGTTAAAATTGTTCATACTTCTTCTAAGTATGAAGGCCAAGTATATATCCCTCAAGTCAACTTTCTACTCATGCTTGCTTCTTTAGCTGTCACTCTTGCCTTCAAGGACACTAACAAGATAGGAAATGCTTATGGCATAGCTGTTGTGTTCGTGATGACTCTCACATCTTCATTCTTAGTATTAATCATGATCATGATTTGGAAAACCCACATGGTTTTGATAATCATTTACATTCTTGTCATCGGTTCATTGGAGCTTCTTTATTTGAGCTCAGTCCTTTACAAATTTGATCAAGGAGGTTACCTTCCACTTGCTTTTGCCTTTGCACTTATGGCCATTATGTACACTTGGAACACTGTCTATAGAAGAAAATACTATTATGAGCTTCATAACAAGATCTCTTCTCATCAACTCAAGGACATTTTATCAGTTGCCAATCCTTGTAGAGTTCAAGGCCTTGCCATTTTCTACTCAGAGCTTGTACAAGGCATTCCTCCCATTTTCAAGCTTTACATGGCGAACGTCCCCGTCCTTCATCAAACTCTCGTATTTATCTCGATCAAATCATTGCCTATAAGCAAGGTCCCATCAGACGAGCGATTTCTCTTTCGCAGAGTTGAGCCAAGAGAGCTTGGTATCTTTCGATGTGTCGTGAGGTACGGTTACAAAGATGGTCACAACGACGTGCAAGAATCGTTTGAGAGAAGTTTGGTGGAGAAATTGAAAGGGTTTTTAAGGGATGATGTTAGGGTTAGTGTCAAAGTGGAAGAGGAGGAAGATCATGAGAATGGGGTAATAATTGAGGAAGAGAAACAGAATATTAGAGAAGTGGAATTGGAGAAAGAGATTGAGGATGTTGATAAAGCTTGGGAAAATGGTGTGGTTCATTTGGTTGGAGAAAGTGAAATTATTGCTAAGGAAGGATCCAATCTTTGGAAAAGGATTTTGATTGATTATATTTACAATTTCTTGAGAAACAATTTGAGACAAAGTGAAAGAGTGTTTGATATTCCTCACAATCGTTTGCTTAAAGTGGGAATGACATATGAGCTTTAA 2253 40.66 MAREVEITDDLKVLSLPKLRRFDSLDIESNNLDGHRGNRAAAGWWVTLQLAFQSIGIVYGDIGTSPLYVFQSSFPVGIKHKDDVLGVLSLIYYTLTLIPLVKYVFIVLQANDNGDGGTFAMYSLLCRYAKVGLIPSQQAEDEEVSNYELDIPNNRVRRASWLKSQLENRRSAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIRIAISSITQDTIVGISAGILVCLFMAQRFGTDKVGYTFAPIICIWFIFIAAIGFYNFVNYDPSVVTALNPKYIIDYFRRNKTEAWISLGGIVLSITGTEALFADVGHFSVRSIQISMCAVTYPALLLAYTGQASYLRIHIDDVGDTFFKSIPDPLYYPMFVVAVLSTIIASQAMISGTFSIIQQSLSLGCFPRVKIVHTSSKYEGQVYIPQVNFLLMLASLAVTLAFKDTNKIGNAYGIAVVFVMTLTSSFLVLIMIMIWKTHMVLIIIYILVIGSLELLYLSSVLYKFDQGGYLPLAFAFALMAIMYTWNTVYRRKYYYELHNKISSHQLKDILSVANPCRVQGLAIFYSELVQGIPPIFKLYMANVPVLHQTLVFISIKSLPISKVPSDERFLFRRVEPRELGIFRCVVRYGYKDGHNDVQESFERSLVEKLKGFLRDDVRVSVKVEEEEDHENGVIIEEEKQNIREVELEKEIEDVDKAWENGVVHLVGESEIIAKEGSNLWKRILIDYIYNFLRNNLRQSERVFDIPHNRLLKVGMTYEL 750
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31793841 31801303 + MELO3C016040.2.1 Cme01g02347 319323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02347 750 TIGRFAM kup: potassium uptake protein 50 749 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme01g02347 750 PANTHER POTASSIUM TRANSPORTER 9 749 - -
Cme01g02347 750 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 9 749 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme01g02347 750 Coils Coil 666 686 - -
Cme01g02347 750 Pfam K+ potassium transporter 51 623 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02347 Cme-Chr1:31793841 Cme07g02155 Cme-Chr7:26036597 0 dispersed
Cme01g02344 Cme-Chr1:31770142 Cme01g02347 Cme-Chr1:31793841 1.13E-24 proximal
Cme01g02345 Cme-Chr1:31772655 Cme01g02347 Cme-Chr1:31793841 1.64E-23 proximal
Cme01g02347 Cme-Chr1:31793841 Cme01g02348 Cme-Chr1:31806492 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02347 K03549 - csv:101204520 1392.48