Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02348 ATGGAAGTCGATCCGACGACTGACAACAATCGCTTTCCCGATTTCCAAGAGAGCTCCTATGAGTCGAGCCCCAACTTGCCGGAAAGGAAGCTTCGACGAAACGATTCATTGGACGTCGAATCCCGCACCGTCCCCGGTGCCGCCGGCGCCCATGGTCACAAGGCGGCGGGAACGGCGGCGGCGACGGCGAGCTGGGGAGTGATTTTGCATTTGGCATTTCAAAGCGTGGGAATTGTGTACGGTGATATTGGAACGTCGCCGTTGTATGTGTATGCAAGCACATTCATCGACGGAATCAAGCATAACGATGACATTCTAGGAGTCCTGTCTTTGATTCTCTACACCCTCACTTTGATCCCTTTGGTTAAGTATGTCTTCTTCGTCTTGCAAGCCAACGACAACGGCGAAGGTGGTACATTTGCATTATACTCATTACTATGCCGATACGCAAAAATCGGGTTGATACCAAGCGAGCAAGTGGAAGATCAAGAGGTATCAAATTTTCAACTGGAGCTTCCCAACAATCGCCTTAAAATGGCCTCTTGCCTTAAATCTAAACTTGAAAACAGCCGTGCTGCTAAGATTTTCTTGCTCTTTGCCACCATGCTCGGCACTTCCATGGTCATCGGCGATGGCGTCCTCACTCCTTCCATATCCGTTTTGTCGGCTGTTGGAGGAATCAAGAATGCTACTTCCACTATGACACAAGACAAAATAGTTTGGATATCAGCAGCAATCTTGGTTTGTCTATTCATGGTACAAAGATTTGGAACCCATAAAGTTGGATATTCCTTTGCTCCAATTATTTGCATTTGGTTTGCACTAATTGGTGGCATTGGCTTCTACAATTTTTTGAAATTTGATCCTTCTGTCATCAAAGCTGTTAATCCAAAATACATTTTTGACTACTTCAAAAGAAACAAAAAGGATGCTTGGATCTCTCTCGGCGGTGTCGTTCTTGCCATTACAGGAACTGAAGCTCTCTTTGCGGATGTGGGGCACTTCACTGTGATGTCCATAAGGCTAAGCATGTGTTGTGTGGCCTACCCCGCCCTCGTCTCTGCATACGTTGGTCAAGCCGCCTTCCTTCGTAAGCACAACGATCTTGTCTCTGACACCTTCTTTAGCTCCATTCCAGGTCCTCTCTACTGGCCGATGTTCGTGGTGGCTGTGCTCGCCTCCATTGTTGCCAGCCAAGCCATGATCTCTGGAACCTTCTCCATCATCCAACAGTCTCTCTCCTATGCCTGTTTCCCTAGAGTTAAAGTTGTTCATACTTCTTCCAAGTACGAGGGCCAAGTTTACATCCCTGAGGTTAACTATCTTCTCATGTTGGCATGTCTTGGAGTCACTCTAGGATTTAAAGATACGACCCGAATTGGAAACGCTTATGGCATTGCAGTGGTGTTCGTAATGGCACTCACGTCAAGTTTCCTAGTGCTCATCATGATCATGATATGGAAATCTCACATACTTGTTATAATCTCCTATGTTCTCACCATTGGCTTACTAGAACTTCTCTACCTAAGTTCAGTCCTTTACAAGTTTGATCAAGGTGGCTACCTTCCTTTAGCTTTTGCTGGCTTTTTAATGACAATAATGTATATTTGGAACGATGTTCATAGAAGAAAATACTATTATGAACTTGAACATAAGATTTCTCCTCAAAAACTCAAGAACATTGCTTCTCTCACGACTCTCAATCGAGTCCCTGGCCTTGCCTTATTCTACTCTGAGCTTGTCCAAGGCATTCCTCCAATCTTCAAGCATTATCTAGCCAACATTCCCTCTCTCCAAAGGGTTCTCGTTTTCGTTTCATTCAAGTCTCTCCCGATAAGTAAAGTCTCAATGGAAGAGCGGTTCCTATTTCGTCGAGTCGAGCCTGACAACCTTAACGTGTTTCGATGTGTGGTGAGATATGGATACAGAGATATCATCCATGAGCAAGAATCGTTCGAGAGAGTGTTGGTAGAGAGGTTGAAAATGTTTATAGAGGAGGAGTCGTGGAAGCTGCAAAATGACAACGACAATAGAGCGGAGGAAAGAAGGAGGAGAATAGGAGAGGAGATAGAGGTGGTGGATAGAGCTTGGAGAGATGGAATTGTTCACTTGATTGGACAAAATGAGGTTGTGGCAAGTAAAGGGTCAGGATTAGCAAAAAGGGTTTTGATTAATTATGCTTATAATGCATTGAGGAGAAATTTGAGACAAAGTGAGGAGGTCTTTTACATCCCCAGAAAACGTATGCTTAAAGTGGGTATGACTTATGAGCTGTAG 2277 44.66 MEVDPTTDNNRFPDFQESSYESSPNLPERKLRRNDSLDVESRTVPGAAGAHGHKAAGTAAATASWGVILHLAFQSVGIVYGDIGTSPLYVYASTFIDGIKHNDDILGVLSLILYTLTLIPLVKYVFFVLQANDNGEGGTFALYSLLCRYAKIGLIPSEQVEDQEVSNFQLELPNNRLKMASCLKSKLENSRAAKIFLLFATMLGTSMVIGDGVLTPSISVLSAVGGIKNATSTMTQDKIVWISAAILVCLFMVQRFGTHKVGYSFAPIICIWFALIGGIGFYNFLKFDPSVIKAVNPKYIFDYFKRNKKDAWISLGGVVLAITGTEALFADVGHFTVMSIRLSMCCVAYPALVSAYVGQAAFLRKHNDLVSDTFFSSIPGPLYWPMFVVAVLASIVASQAMISGTFSIIQQSLSYACFPRVKVVHTSSKYEGQVYIPEVNYLLMLACLGVTLGFKDTTRIGNAYGIAVVFVMALTSSFLVLIMIMIWKSHILVIISYVLTIGLLELLYLSSVLYKFDQGGYLPLAFAGFLMTIMYIWNDVHRRKYYYELEHKISPQKLKNIASLTTLNRVPGLALFYSELVQGIPPIFKHYLANIPSLQRVLVFVSFKSLPISKVSMEERFLFRRVEPDNLNVFRCVVRYGYRDIIHEQESFERVLVERLKMFIEEESWKLQNDNDNRAEERRRRIGEEIEVVDRAWRDGIVHLIGQNEVVASKGSGLAKRVLINYAYNALRRNLRQSEEVFYIPRKRMLKVGMTYEL 758
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31806492 31812004 + MELO3C016041.2.1 Cme01g02348 319324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02348 758 MobiDBLite consensus disorder prediction 1 51 - -
Cme01g02348 758 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 28 757 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme01g02348 758 PANTHER POTASSIUM TRANSPORTER 28 757 - -
Cme01g02348 758 MobiDBLite consensus disorder prediction 8 25 - -
Cme01g02348 758 Pfam K+ potassium transporter 72 644 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme01g02348 758 TIGRFAM kup: potassium uptake protein 71 757 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02344 Cme-Chr1:31770142 Cme01g02348 Cme-Chr1:31806492 3.07E-33 dispersed
Cme01g02345 Cme-Chr1:31772655 Cme01g02348 Cme-Chr1:31806492 2.95E-25 dispersed
Cme01g02348 Cme-Chr1:31806492 Cme07g02155 Cme-Chr7:26036597 0 dispersed
Cme07g02156 Cme-Chr7:26038773 Cme01g02348 Cme-Chr1:31806492 2.11E-45 dispersed
Cme01g02347 Cme-Chr1:31793841 Cme01g02348 Cme-Chr1:31806492 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02348 K03549 - csv:101213493 1399.8