Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02404 ATGGACGATAGCTGTGCTGTGTGTGCCGATACTCTTGAATGGGTTGCCTATGGGTCTTGCGGTCATCGGGATGTTTGCTCCACCTGCGTTGCTCGTCTTCGATTCATTTGTAGTGATCGCCGTTGTTGCATCTGCAAGTCCGAATCCGCTGTCGTGTTTGTCTCTAAGAATAAAAACCATAGTATTAATGAATTTAGGAACAATGGTTTCAATGCCTTGGGAGATTATACTAGGACGATTAACGACTTCACAGTCTTTCCTTCAGAACCAAAAGAGGGTCGTAGTGGATCCTATTGGTATCATGAAGACACACAAGCATTTTTTGATGATGCTGACCACTACAAGATGATAAAAGCAATGTGTAGGTTGTCATGCAGTGTGTGTGATAAGATAGGTGAAGATCAACCAAATGATGCCTCAAAGCGCCGAGGAAGATTTCGGAATATTGAGCAGCTAAAGGGTCATTTGTTTCATCGGCATAAGTTGTTCATGTGCAGCCTTTGTCTGGAAGGCAGGAAGGTTTTTATTTGTGAACAAAAGCTATATAATAGAGCACAATTGAATCAGCACATACACACTGGTGACTCTGAGGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTCACCGGGCACCCTATGTGTGAATTTTGCAGAACTCCATTTTACGGAGATAATGAGCTGTATACTCATATGTCAACTGAGCATTATACATGTCATATATGCCAAAGGCTCCATCCTGGACAGTATGAATACTATAAGAACTATGATGACCTAGAGGCAATGAGCTTCTTTTGGCGACAGATTCATTTCCGACAAGGACATTTTCTTTGTGAAGACGAAGGCTGCCTTGCTAAAAAATTTGTTGTGTTCCAATCTGAAGCAGAAATGAAGAGGCACAATACTATTGAACATGGTGGCAAGCTATCTCGATCGAAGCGAAATGCTGCCTTGCAGATACCAACCAGTTTTCGATATCGAAGAAGTAACGAGCAAGATAATCGCCGTGGCAGACGAACATTTCGTCGTGATTCTTCGGATGATCTACTTTCTTTGGCCATTCAAGAAAGTTTTGAAACAGCCAATGTTGATGACAACAATCATGACCCATTACCTAGCGGACAAGTAGCCTCGGATCAGGAAAATGTAAGCAACGTTGACCCCTTGATTGAACCATTCGAAGCATTAGCAACAACAGATCCTGAATCAGCTTCTCGATACCTTCAAGCCTTGGGCCATTCTAGGAATTCCCAATTGGAGCAATCATCCTTTCCCCCCCTTTCAACTGCATCTAGCAGTAGCCATCCAAAGCCCAATCAGGACAAAGACAGTATGGCAGCTCATCTTCGGCGCCAGAGGAATAATGTGACCGTTTTAAATTCTGCAGGTTGGCCAAAATCAAGTCGTGCCCCTGTGCTACCTTCAAATAACTCATCTCAAGCTTGGCCAGCAATAAATTCCAATCATTCAGCTTCAAGCAGTTCTGGGCAGACTAAGGGGGTTGCCACCATTAATAACGGCCCTTCAGTCTCTGCTTACGCAAATGCTGCTCAGATGCATCCGAAGCCTCGATCTAGTTCTTCAAGTGGATCAGGCAGTAGCAGTAGGATCAGCCACTCTGCTTCCGCGCCCAATCTCACCGACATTGCGCATACCGAACCGTCACTTAACGAATTCCCTCCAGTATCTGCAGCACAGGCACGGAAAGTGCCATCAAGTAGCCAAAGTTCAATGAACGTGGAAGATGTCCAGACAGCAAACAAATCTCTAGTAGAAAAGATACGTGCTGCACTCGATTTTGACCAAGATAGATATTCCATTTTTAAAGATATATCTGCACAATATCGTCAGGGTCAGATTGACACGGAAATGTATCTAGATTGCGTTCAACAGTTTGGTTTGTCGCATCTTTTGCTTGAGTTGGCTAGGCTCTGTCCTGATCCTCAGAAACAGAAAGAACTTGTGGAGACCTATAACGCTAGTTTTCATAAAGATGTGATCCCAGTCAATGGTAGAGCTCAAGATAGTATTCAAATTAAAGACAAAAGCAAGGGGAAAAAAGTTCCAAAGACAAATTAG 2076 43.59 MDDSCAVCADTLEWVAYGSCGHRDVCSTCVARLRFICSDRRCCICKSESAVVFVSKNKNHSINEFRNNGFNALGDYTRTINDFTVFPSEPKEGRSGSYWYHEDTQAFFDDADHYKMIKAMCRLSCSVCDKIGEDQPNDASKRRGRFRNIEQLKGHLFHRHKLFMCSLCLEGRKVFICEQKLYNRAQLNQHIHTGDSEVDGSESERGGFTGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRLHPGQYEYYKNYDDLEAMSFFWRQIHFRQGHFLCEDEGCLAKKFVVFQSEAEMKRHNTIEHGGKLSRSKRNAALQIPTSFRYRRSNEQDNRRGRRTFRRDSSDDLLSLAIQESFETANVDDNNHDPLPSGQVASDQENVSNVDPLIEPFEALATTDPESASRYLQALGHSRNSQLEQSSFPPLSTASSSSHPKPNQDKDSMAAHLRRQRNNVTVLNSAGWPKSSRAPVLPSNNSSQAWPAINSNHSASSSSGQTKGVATINNGPSVSAYANAAQMHPKPRSSSSSGSGSSSRISHSASAPNLTDIAHTEPSLNEFPPVSAAQARKVPSSSQSSMNVEDVQTANKSLVEKIRAALDFDQDRYSIFKDISAQYRQGQIDTEMYLDCVQQFGLSHLLLELARLCPDPQKQKELVETYNASFHKDVIPVNGRAQDSIQIKDKSKGKKVPKTN 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32349937 32355836 + MELO3C023608.2.1 Cme01g02404 319380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02404 691 PANTHER EBR1 1 686 - -
Cme01g02404 691 MobiDBLite consensus disorder prediction 359 381 - -
Cme01g02404 691 MobiDBLite consensus disorder prediction 457 512 - -
Cme01g02404 691 CDD RING-HC_ZNF598 5 46 IPR041888 -
Cme01g02404 691 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Cme01g02404 691 MobiDBLite consensus disorder prediction 413 444 - -
Cme01g02404 691 PANTHER ZINC FINGER PROTEIN 598 1 686 IPR044288 GO:0061630|GO:0072344
Cme01g02404 691 MobiDBLite consensus disorder prediction 413 439 - -
Cme01g02404 691 MobiDBLite consensus disorder prediction 519 551 - -
Cme01g02404 691 MobiDBLite consensus disorder prediction 457 579 - -
Cme01g02404 691 SMART c2h2final6 123 160 IPR013087 -
Cme01g02404 691 SMART c2h2final6 212 235 IPR013087 -
Cme01g02404 691 SMART c2h2final6 275 304 IPR013087 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02404 K22381 - csv:101214376 1253.04