Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme01g02420 | ATGCTTTTTGCTGCCTTATATTGCATGACTATTCAACTTATTCTCCACTTTTTCACAACAAAAACTTCCTCCATGTTTTCCCATGCATTTCCATTCCTTCATCACAAACCCATCATGGATTCTGGAAACCTCTCCTCCTCCTCTTCCTCCTCCTTGCCCCCTTCGATTTCCGTCCGACACTTTGGGCTCCAATCGCTCCTCGATGTCCAAATCTTAGAGATCTCTTTTGCCCTTTTTGTGTTCTTGGTTATTCATGTTGTTAGACAGAAGAGACGACATGGCTTGCCTATATGGCCAATCGTCGGAATGTTACCAGCTTTGATTACGGCAACACGTGGGAATCTCTACGAGTGGATTACCGACCTCTTGTGTCGTCACAAGGGCACATTTCAATTTCGAGGTCCGTGGCTTACTAGTCTCAATTGCGTCGTCACTGCTGATCCTCGAAACTTAGAACACCTTCTCAAGACAAAATTTTCTTCCTACCCAAAAGGGTCGTTCTTCCGCGACACCGTGAGAGACTTACTTGGTGATGGAATATTCGGGGCTGACGACGAGACATGGCAACGACAGAGGAAGGTGGCGAGCATTGAGTTTCACTCGGCAAGGTTTCGACAAATGACGGTGGAGTCGTTGGTGGAGCTTGCGCACTCGAGGCTGGAAGCAGTGTTGGAGGATTTTGCGGGGAAGTCGACAACGGTGGACTTGCAAGATGTTCTTTTGAGGTTGACGTTTGACAATGTGTGTATGATTGCCTTTGGGGTGGATCCCGGTTGCTTGCGCGGAGGCTTGCCGGAGATTCCATTTGCTAAGGCCTTTGAGGATGCAACTGAAGTCACTGTTATGCGCTTCATCACACCTACATTCATATGGAAAGCCATGAGGTACCTGAACATAGGAATTGAGAAGAAGTTGAAGCAATCGATCAAAGCCGTCGACGAATTTGCGGAGAACGTGATTCAAACACGGAAGAGAGAACTCTCTACGCCGGCGGAATCTCAAGCCGACAACAAAAGATCCGACCTATTAACTGTATTCATGAAGCTGAGAGACGAGCAAGGGCGCCCATTCTCTGATAAGTTTCTCAGAGATATTTGCGTCAATTTCATACTCGCCGGAAGAGACACGTCTTCCGTAGCATTGAGTTGGTTCTTCTGGTTGCTCGATCAAAATCCCGATGTAGAAGATAAAATTCTAGCAGAAATTTGCAGAATTGTCGGCGAACGAGAAGAGGCCAAAACCAGAGAGCTTCGATTCGATTCATTAGTGTTCAAACCAGAAGAGATAAAAAAAATGGAGTATTTGCACGCCGCCATTTCCGAAGCCCTAAGATTGTATCCATCAGTTCCATTCGATCACAAAGAGGTTGTGGAGGACGATACATTCCCAGACGGAACGATTCTGAAGAAAGGAATGAAAATCATCTACGCAATATACGCAATGGGAAGAATGGAAGCGATTTGGGGGAAAGATTGTCGCGAATTCAAACCTGAGAGATGGATGAGAGACGGTCGATTCATGAGCGAATCGGTGTATCGATTCACCGCCTTCAATGGGGGCCCTCGGCTGTGTCTTGGAAAAGATTTTGCGTATTATCAAATGAAATACGTGGCGGCTTCTATCATCAGCCGGTACCGGGTGGCGGTGGTGGCGGGGCATCCGGTGGAGCCGAAGCTTTCCCTAACTTTCTACATGAAGAAGGGGTTGAAGGTCAATTTGATTAAACGAGAAGAGGGGCAAATTCGGAAATACATGAAGTTAAATTGA | 1767 | 46.69 | MLFAALYCMTIQLILHFFTTKTSSMFSHAFPFLHHKPIMDSGNLSSSSSSSLPPSISVRHFGLQSLLDVQILEISFALFVFLVIHVVRQKRRHGLPIWPIVGMLPALITATRGNLYEWITDLLCRHKGTFQFRGPWLTSLNCVVTADPRNLEHLLKTKFSSYPKGSFFRDTVRDLLGDGIFGADDETWQRQRKVASIEFHSARFRQMTVESLVELAHSRLEAVLEDFAGKSTTVDLQDVLLRLTFDNVCMIAFGVDPGCLRGGLPEIPFAKAFEDATEVTVMRFITPTFIWKAMRYLNIGIEKKLKQSIKAVDEFAENVIQTRKRELSTPAESQADNKRSDLLTVFMKLRDEQGRPFSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNPDVEDKILAEICRIVGEREEAKTRELRFDSLVFKPEEIKKMEYLHAAISEALRLYPSVPFDHKEVVEDDTFPDGTILKKGMKIIYAIYAMGRMEAIWGKDCREFKPERWMRDGRFMSESVYRFTAFNGGPRLCLGKDFAYYQMKYVAASIISRYRVAVVAGHPVEPKLSLTFYMKKGLKVNLIKREEGQIRKYMKLN | 588 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 32482869 | 32485379 | - | MELO3C023592.2.1 | Cme01g02420 | 319396 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme01g02420 | 588 | Coils | Coil | 574 | 588 | - | - | |
Cme01g02420 | 588 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 517 | 526 | IPR017972 | GO:0005506|GO:0016705 | |
Cme01g02420 | 588 | SUPERFAMILY | Cytochrome P450 | 94 | 576 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02420 | 588 | PRINTS | P450 superfamily signature | 372 | 389 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02420 | 588 | PRINTS | P450 superfamily signature | 524 | 535 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02420 | 588 | PRINTS | P450 superfamily signature | 515 | 524 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02420 | 588 | PRINTS | P450 superfamily signature | 437 | 448 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02420 | 588 | PANTHER | CYTOCHROME P450 86B1-LIKE | 59 | 577 | - | - | |
Cme01g02420 | 588 | PRINTS | E-class P450 group I signature | 361 | 378 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02420 | 588 | PRINTS | E-class P450 group I signature | 514 | 524 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02420 | 588 | PRINTS | E-class P450 group I signature | 381 | 407 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02420 | 588 | PRINTS | E-class P450 group I signature | 436 | 454 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02420 | 588 | PRINTS | E-class P450 group I signature | 524 | 547 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02420 | 588 | PANTHER | CYTOCHROME P450 | 59 | 577 | - | - | |
Cme01g02420 | 588 | Gene3D | Cytochrome P450 | 90 | 586 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02420 | 588 | Pfam | Cytochrome P450 | 95 | 561 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g02420 | Cme-Chr1:32482869 | Cme09g01772 | Cme-Chr9:22177392 | 3.00E-156 | dispersed | |
Cme06g00241 | Cme-Chr6:1447405 | Cme01g02420 | Cme-Chr1:32482869 | 5.05E-112 | dispersed | |
Cme08g00490 | Cme-Chr8:3027202 | Cme01g02420 | Cme-Chr1:32482869 | 2.49E-116 | dispersed | |
Cme02g02059 | Cme-Chr2:26588824 | Cme01g02420 | Cme-Chr1:32482869 | 5.44E-110 | transposed | |
Cme04g02412 | Cme-Chr4:30766416 | Cme01g02420 | Cme-Chr1:32482869 | 7.83E-107 | transposed | |
Cme12g00613 | Cme-Chr12:10954273 | Cme01g02420 | Cme-Chr1:32482869 | 4.58E-111 | transposed | |
Cme01g02420 | Cme-Chr1:32482869 | Cme04g01598 | Cme-Chr4:23256961 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme01g02420 | K15402 | - | csv:101212202 | 1115.91 |