Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02432 ATGGCGGAATCCGAGCATCGTGCTAAGCGCCCTAGAATTACGAGGGGGGAAGATGATTATATGCCTGGAAGTATAATTGAGATTGAGCTTCATAACTTTATGACCTTTAACCACCTGAAGTGTAAACCAGGATCGCGTCTAAACCTTGTAATTGGGCCTAATGGATCTGGTAAAAGCTCTATTGTATGTGCTATTGCCCTTGGCCTTGGTGGTGAGCCTCAGCTCCTTGGAAGGGCAACCAGTGTTGGAGCATACGTGAAGCGTGGGGAGGAGTCTGGTTATGTTAGAATAACCTTGAGAGGGAATACTAAAGAAGAGAAGATTACAATTACACGTAAAATGGACACGCACAACAAATCTGAGTGGCTGTTCAATGGAAAAGTTGTGCCGAAAAAAGATGTAGCTGGAGTCATTCAAAGGTTTAATATTCAAGTTAATAATTTAACTCAATTTTTACCTCAGGACAGGGTTTGTGAGTTTGCCAAATTAACTCCTGTGCAACTTTTAGAAGAGACTGAAAAGGCAGTTGGTGACCCTCAACTTCCTATCCTACATCGTGCACTTGTTGATAAAAGCCATGGCATAAAAAGTATTGAAAGAGCTGTTGAGAAAAATGGTGAAACCCTAGATCAGTTGAAGGCATTAAATGTTGAGCAAGAGAAAGATGTTGAGCATGTTCGTCAAAGAGATGAACTTTTAAAAAAGGTTGAGTCCATGAAAAAGAAACTGCCATGGTTAAAGTATGACATGAAAAAGGCTGAATACTTGGAAGTTAAGGAAAAAGAAAAGGAGGCCAAAAAGAAGTTAGATGAAGCTGCTAACACTTTGAATGATCTAAAGGAGCCAATTGAGAAACAAAAAATGGAGAAGGCAAAGTTGGATGCTAAAACTAAAAAGTATAGCACTCGTATTAATGATAATCACAAGAAAAGGATGGAACTTCAGGAAACTGAAAACCGTTTGGGGGTGCAAGTGCAAGGAAAATTGAAAGAAATGGAAGACTTGAGGAAACAAGAAGAATCTCGTCAACAGAGAATCTTACGAGCTAAAGAGGAACTTGAAGCTGCTGAGTTTGAACTTCAGAGTTTGCCTGCTTATGAACATCCCAAGGACGAGATCGAACGGTTGCGTGCTCAAATTTTGGAATTGGAAGCTTCAGCTAGTCAGAAGAGACTTATGAAGTCAGAGATTGAGAAAAACATTTCCCAAAAAAGAAATAATTTGAGGCAATGCTCGGATAGGTTAAAGGATATGGAGAATACTAATACAAAACTACTACAGGCATTGAAAAATTCTGGAACAGAGAAGATCTTTGAAGCTTATCACTGGCTTCAAGAACATCGCCATGAGTTCAAGAAGGAGGTGTATGGTCCAGTGTTGCTAGAGGTTAATGTGTCTAATCGGACTCATGCTGACTACTTAGAAGGTCATATTCCATCCTATGTCTGGAAGTCCTTCATCACCCAAGATTCCGATGATCGCGACATTATGGTAAAAAACTTGGGCTCTTTTGGCGTTCCTATCTTAAACTATGTGGGAGGTGAAAGGCGCACAAATCAGCATTTTGAGTTGTCTGAGGAGGTTCGTGCATTTGGCATATATTCTCGGCTAGACCAAATTTTTGAAGCTCCTGCAGCTGTAAAGGAGGTTTTAACCATGCAGTTTGGTTTAGAACATTCATATATTGGTTCAAAGGTAACTGATCAAAAGGCAGACGAGGTCTCAAAATTGGGAATTTTAGATTTTTGGACTCCAGATAATCATTATCGATGGTCTCGCTCTAGATACGGTGGTCATATGTCCGGAAGTGTGGAACCAGTTGATCGCTCACGTCTTCTTTTGTGCAACTTGGATGCGGGAGAAATTGATGGGCTTCGCTCTAGGAAAAATGAGCTAGAAGAATCTGTTTCTGCCTTAGAAGAAAATTGTAAATCATGTCAGAATGAGCTAAGATTGATAGAAGACGAAGAAGCTAAACTTCGCAAACATCGGGAAAACATTTTAAATACTGTGCAACATGAGAAGAGAAAACGACGTGAGATGGAAAATCGCATTGATCAAAGGAAAAAGAAATTAGAATCTATGGAGCGGGAAGAAGACTTGGATACTGTTGTGGCCAAGCTTGTCGACCAAGTTGCAAATTTTAACATTCAGAGGTTCCGTTGTGCAATTGAAATTAAGCATTTGCTTCTTGAAGCCGTTTCCTATAGACAGAGCTTGACTAAGAACCATATGTCTTCCATTGAAATTGAAGCAAAGATCAGAGAATTGGAGGTTAATCTAAAGCAGCATGAAAAGGTTGCTCTGCAAGCGTCAGTGCAGTTTGAGTACTGCAAGAAGGAAGTTGAGGACTATCTACAGCAACTTTCAGCTGCCAAGAAGTATGCAGAATCTATTGCTGCAATCACACCTGAACTTGAGAAGGAATTTCTTGAGATGCCTACTACAATTGAGGAATTGGAGGCTGCTATTCAAGATAACACCTCTCAAGCTAATTCCATTCTATTCTTAAACCATAACGTGCTTGAGGAATATGAACATCGTCAGCGTCAGATAAACATTATTGCACGAAAACTAGAGGCTGATAAACATGAACTAAGGAAGTGTATGGCTGAAGTTGATGACCTGAAGGGAAATTGGCTCCCAACATTAAGAAAGCTTGTTTCTCAGATAAATGAAAGTTTTAGTCGCAATTTTCAAGAGATGGCTGTTGCTGGAGAAGTGTTACTGGATGAGCATGATATGGACTTTGATCAATTTGGAATACTTATTAAAGTGAAGTTCAGACAATCAGGTCAGCTTCAGGTTCTCAGTGCACATCATCAATCTGGAGGGGAACGATCTGTGTCAACAATTCTGTATCTCGTTTCCCTTCAAGACCTTACCAACTGCCCATTTAGAGTAGTTGACGAGATAAACCAAGGAATGGATCCCATAAATGAACGGAAGATGTTCCAGCAATTAGTGAGAGCTGCCAGTCAAACCAATACACCACAGTGTTTCCTATTGACTCCAAAGTTACTTCCAGAACTGGAATATAGTGAGGCCTGTACTATACTGAATATAATGAATGGTCCTTGGATCGAGCAGCCCTCAAGAGCATGGAGCAATGGAGATAGCTGGGGAACGTTGATGAACTACGTAGGGAAAAGCCGATGTTGA 3162 40.39 MAESEHRAKRPRITRGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKMDTHNKSEWLFNGKVVPKKDVAGVIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRALVDKSHGIKSIERAVEKNGETLDQLKALNVEQEKDVEHVRQRDELLKKVESMKKKLPWLKYDMKKAEYLEVKEKEKEAKKKLDEAANTLNDLKEPIEKQKMEKAKLDAKTKKYSTRINDNHKKRMELQETENRLGVQVQGKLKEMEDLRKQEESRQQRILRAKEELEAAEFELQSLPAYEHPKDEIERLRAQILELEASASQKRLMKSEIEKNISQKRNNLRQCSDRLKDMENTNTKLLQALKNSGTEKIFEAYHWLQEHRHEFKKEVYGPVLLEVNVSNRTHADYLEGHIPSYVWKSFITQDSDDRDIMVKNLGSFGVPILNYVGGERRTNQHFELSEEVRAFGIYSRLDQIFEAPAAVKEVLTMQFGLEHSYIGSKVTDQKADEVSKLGILDFWTPDNHYRWSRSRYGGHMSGSVEPVDRSRLLLCNLDAGEIDGLRSRKNELEESVSALEENCKSCQNELRLIEDEEAKLRKHRENILNTVQHEKRKRREMENRIDQRKKKLESMEREEDLDTVVAKLVDQVANFNIQRFRCAIEIKHLLLEAVSYRQSLTKNHMSSIEIEAKIRELEVNLKQHEKVALQASVQFEYCKKEVEDYLQQLSAAKKYAESIAAITPELEKEFLEMPTTIEELEAAIQDNTSQANSILFLNHNVLEEYEHRQRQINIIARKLEADKHELRKCMAEVDDLKGNWLPTLRKLVSQINESFSRNFQEMAVAGEVLLDEHDMDFDQFGILIKVKFRQSGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQTNTPQCFLLTPKLLPELEYSEACTILNIMNGPWIEQPSRAWSNGDSWGTLMNYVGKSRC 1053
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32546528 32562188 - MELO3C023581.2.1 Cme01g02432 319408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02432 1053 CDD ABC_SMC5_euk 926 1028 - -
Cme01g02432 1053 CDD ABC_SMC5_euk 23 180 - -
Cme01g02432 1053 Gene3D - 24 221 IPR027417 -
Cme01g02432 1053 Coils Coil 329 356 - -
Cme01g02432 1053 Coils Coil 842 879 - -
Cme01g02432 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 750 1005 IPR027417 -
Cme01g02432 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 996 IPR027417 -
Cme01g02432 1053 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 19 1049 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Cme01g02432 1053 Coils Coil 747 774 - -
Cme01g02432 1053 Gene3D - 847 1022 IPR027417 -
Cme01g02432 1053 Coils Coil 198 229 - -
Cme01g02432 1053 Coils Coil 622 698 - -
Cme01g02432 1053 Pfam RecF/RecN/SMC N terminal domain 25 994 IPR003395 -
Cme01g02432 1053 Coils Coil 373 428 - -
Cme01g02432 1053 Coils Coil 252 279 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02432 Cme-Chr1:32546528 Cme06g00888 Cme-Chr6:6215120 8.75E-10 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02432 K22803 - csv:101210248 2010.73