Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02473 ATGGCTATGGCTGGGCGTATGAGATCGATCATTCCTCAATTCAATCAGCTTCTGAAATCGGAGTCACAGACTCAGAGATCTGCTCTTACAAGAGCCCTACTTTGCCCCACGACTGCCAACTCCGAGATCTCGAGGAACTATGCAACTTCTTCCAAGAAAACCGAGGCAAAAGTTAAAGTTCCTGTGGCTTTGTTTGGGGGGACTGGAAACTATGCCTCTGCTTTGTACATTGCAGCAGTAAAAGCTAATTGCTTGGATAAGGCTGAGACAGAGCTTCTAGACTTTACCGAGGCTTCAAAGAGAAGTACCACCTTCTCTGAGTTCATAAATGATCCCACAGTGCGTAAAGATACCAGGATCAAGGTTATTAACGATGTTTGTGCCGAAGCTAAGTTTTCAGAAATTACGAACAACTTTTTGGCTCTATTGGCTGAGAATGGAAGGCTGAAATACGTAGACAGCATTTCAAAGAAGTTTCAAGAGTTGACAATGGCTCATAGAGGAGAGGTGAAAGCCATTGTGACTACTGTTATTCCCCTCCCTGCTGAAGAAGAGAAAGAACTGAAGGAGACTCTACAGGATATTATTGGAGAGGGGAAAAAGGTCAAGCTTGAACAGAAGATTGATCCAAGTATTCTTGGCGGAATAGTAGTAGAATTTGGGGAGAAAGTGTTTGACATGTCGATTAAGAGCAGAGCACAACAGATGGAGCGGTTCTTGCGAGAACCTGCAAACTTCGACAGCCTCTGA 750 44.13 MAMAGRMRSIIPQFNQLLKSESQTQRSALTRALLCPTTANSEISRNYATSSKKTEAKVKVPVALFGGTGNYASALYIAAVKANCLDKAETELLDFTEASKRSTTFSEFINDPTVRKDTRIKVINDVCAEAKFSEITNNFLALLAENGRLKYVDSISKKFQELTMAHRGEVKAIVTTVIPLPAEEEKELKETLQDIIGEGKKVKLEQKIDPSILGGIVVEFGEKVFDMSIKSRAQQMERFLREPANFDSL 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32888430 32892516 - MELO3C023548.2.1 Cme01g02473 319449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02473 249 Gene3D - 68 160 IPR026015 -
Cme01g02473 249 PRINTS ATP synthase delta subunit signature 67 86 IPR000711 GO:0015986|GO:0046933
Cme01g02473 249 PRINTS ATP synthase delta subunit signature 137 148 IPR000711 GO:0015986|GO:0046933
Cme01g02473 249 PRINTS ATP synthase delta subunit signature 148 162 IPR000711 GO:0015986|GO:0046933
Cme01g02473 249 PRINTS ATP synthase delta subunit signature 200 215 IPR000711 GO:0015986|GO:0046933
Cme01g02473 249 PRINTS ATP synthase delta subunit signature 215 233 IPR000711 GO:0015986|GO:0046933
Cme01g02473 249 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 31 242 - -
Cme01g02473 249 Pfam ATP synthase delta (OSCP) subunit 69 238 IPR000711 GO:0015986|GO:0046933
Cme01g02473 249 Hamap ATP synthase subunit delta [atpD]. 63 242 IPR000711 GO:0015986|GO:0046933
Cme01g02473 249 PANTHER ATP SYNTHASE DELTA CHAIN 31 242 IPR000711 GO:0015986|GO:0046933
Cme01g02473 249 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 68 169 IPR026015 -
Cme01g02473 249 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 202 221 IPR020781 GO:0015986|GO:0016020|GO:0046933
Cme01g02473 249 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 70 239 IPR000711 GO:0015986|GO:0046933
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme01g02473 Cme04g01649 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00932 Cme-Chr3:17806564 Cme01g02473 Cme-Chr1:32888430 1.70E-11 transposed
Cme01g02473 Cme-Chr1:32888430 Cme04g01649 Cme-Chr4:23762004 1.18E-60 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02473 K02137 - csv:101206351 420.239