Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme01g02524 | ATGACGAAATTGGCGTATCTTCATGAACCGGGAGTTCTGCATAACCTAGCTTGTCGATTTTCTCTCAATGAGATATACACATACACCGGGAATATTCTAATTGCGGTGAATCCTTTCCGGAGACTGCCCCATTTGTATGATATTCACATGATGGAACAGTATAAAGGAGCTACTTTTGGCGAGCTTAGTCCGCATCTTTTCGCTGTGGCAGACGCTTGTTATAGATCGATGATTAACGAGCAAGGGAGTCAGTCTATATTAGTGAGTGGAGAGAGTGGTGCTGGTAAAACAGAGACAACAAAGATGCTCATGAGATATCTTGCATTCATGGGAGGAAGGTCAGACACTGAAGGAAGAACAGTTGAACAACAGGTTTTGGAGTCCAACCCTGTACTGGAAGCATTTGGAAATGCCAAAACGGTCAAAAACAACAATTCAAGTCGTTTTGGTAAATTTGTGGAAATACAATTTGATAAGAGTTGGAAGATCTCTGGGGCTGCCATTCGTACATACCTTCTCGAACGGTCGCGTGTTTGCCAAGTCTCAGACCCTGAGAGAAACTATCATTGTTTTTACATGCTCTGTGCAGCACCACCAGAAGATGTCAAGAAATTCAAGGTAGGAGACCCAAGGACATTTCATTATCTTAATCAAACGAATTGTTATGAAGTGGCGAATGTTGATGATTCAAGAGAGTACCTAGAGACAAGAAATGCCATGGATGTTGTCGGAATCAACCAGGATGAACAGGATGCTATATTTCGTGTTGTAGCTGCTATACTGCATCTTGGAAACATTGAGTTCATGAAAGGGAAGGAAGTTGACTCCTCCAAAGTGAAAGACGAGAAGTCAAATTACCATCTTCGAACAGCAGCAGAGCTACTCATGTGTGATGTAAAGGCACTGGAACATTCGCTCTGCCAGCGTGTCATAGTGACCCCAGATGGCAACATTACGAAGCCTTTGGACCCAGATTCAGCAGCCTTGAGTCGTGATGCATTGGCAAAAACTGTATATTCTAGGCTGTTTGATTGGATTGTGGACAAAATTAATAGTTCAATTGGCCAAGATCCTAATGCAGCCAGCTTAATTGGTGTCCTTGATATTTATGGTTTTGAAAGCTTCAAGGTCAACAGTTTTGAGCAGCTCTGTATCAACCTGACCAATGAGAAGTTGCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAAGAGGAGTATACGAAAGAAGAAATAAACTGGAGCTATGTTGAGTTTGTGGATAATCAGGATGTCCTTGATCTTATTGAGAAGAAACCTGGAGGTATAATCGCCCTGCTTGATGAAGCCTGTATGTTTCCGAAGTCAACACATGAAACATTTGCTCAAAAGATGTATCAGACGTACAAAGGACATAAGCGGTTCAGCAAGCCAAAACTTGCTCGAACAGACTTCACAATAAACCATTATGCTGGAGATGTTACGTACCAAGCTGATCAATTTCTAGATAAAAACAAGGACTATGTAGTTGCAGAACATCAGGCTCTTCTAAATGCCTCGCAATGTTCTTTTGTCGCTAATCTTTTCCCTCCACTTCCTGAGGAGACCTCAAAGCAATCAAAGTTTTCTTCTATTGGTACTCGGTTCAAGCAACAACTACAAGCTCTCATGGAAACATTGAATACTACAGAACCACATTATATTAGATGTGTAAAACCCAACACAGTTTTGAAACCCGGTATCTTTGAGAACTTCAACGTGTTGAACCAATTGAGGTGTGGGGGAGTGCTCGAGGCAATTAGAATAAGCTGTGCAGGATACCCAACAAAAAGAACATTTGATGAGTTCCTTGATCGTTTTGGAATGCTTGCTCCAGATATTTCGGACGGGTCTGACGAAAAATCAGCATGCATTGCAATATGTGACAGAATGGGCTTAAAGGGTTATCAGATTGGAAAAACAAAAGTGTTCCTCAGAGCTGGACAAATGGCTGAGTTGGATGCACGACGAACTGAAATTTTGGCTAATGCTGTCAGACGCATTCAGCGGCAAATCCGAACCTATCTAACTAGAAAAGAGTTTATTGCGCTGAGAAGAGCTACAATTCATATGCAGAAACTTTGGAGAGGGCAACTTGCACGTAAGCTGTATGAGCAAATGAGGAGAGAAGCAGCTTCAATCCGTATACAGAAGCATGCACGTGCTCACGCAGATAGAAAATCTTACAAAAGATTACTTGCATCAGCTATAGTTATTCAAACTGGTATGCGTGCAATGGCAGCTAGAAATGAGTACAGGCACCGAAGAAGAACGAAGGCTGCTATCATTGTTCAGACTGAATGGCGAAGGGCATCAGCTATTTCAGTTTATAAACAGCAGCAGAAGGCAACTCTTGCCCTTCAATGCCTCTGGCGATCTAAAGTTGCAAGGAAGGAGCTTAGAAAATTAAAGATGGCTGCAAGAGAAACAGGAGCACTCAAGGAGGCCAAGGACAAATTGGAGAAGCGTGTTGAGGAACTAACATGGCGCCTAGAGTTTGAGAAGCACTTGAGGATGGATGTTGAAGAAGCTAAGGGACAAGAGGTCGCAAAGTTACAAAATGCTTTGGAAGAAATGCAAGGGCAGCTGGATGAAGCCAATGCTGCAATTATACGTGAGAGAGAAGCAGCAAAATTGGCCATAGAACAAGCTCCACCAGTCATTAAGGAAGTACCTGTGGTAGACGAGACAAAGCTAGAAATACTGAGAAATCATAATGAAGAACTTGAGGGTGTGGTTGGAGAGCTGAAAAAGAAAATTGAGGAATTCGAAGAAAAGTATGCTGAAGTGGAAAAGGAAAGTAAAGCTAGACTCAAGGAGGCAGAAGAGGCACAATTGAAATCAATGCAACTTCGAGAGACTGTTGAGAGATTGGAATCAAATTTATCTAGCCTTGAGTCAGAGAACCAGGTTCTGCGCCAGCAGGCTTTGGTTGCAGCAGACAACGAGTCCCTCTCTGAAGAACTGGAAGCCCTCAAGAGTAAGATTGGAAGTCTAGAGGCAGAGAATGAAGTTCTCCGCAATCGGACAGTGGCTGTTGAACACATAGTACCTGTTCCCGCTGCAGGCCTTGCAGAAAGCAAGACTTTAGATAATGGGCATCTAATTGAAGAAGAGATTAAATCACCTAAGGAACCATCTACTGTTCCAATTAAATCAACAAAGGAACAATCTACTGTTCCCATCCTAGCTAAACAAGGCTCGCTTACAGAAAAGCAACAGGAAAATCATGATGTCCTGATCAAGTGCTTAGCGGAAGACAAACGTTTTGACAAGGGCAGACCGGTTGCAGCTTGTATTGTCTACAAGACACTTCTTCAATGGAGATCTTTTGAATCAGAGAGGACAAATATATTTGACAGAATTATTCACACAATCAGATCTTCTATAGAGAGTCAAGAAAATATCAGTGATCTTGCCTATTGGCTTTCAACCTCTTCCACCCTTCTCTATCTTCTTCAAAGTTCACTCAAGGCAACCAATACAAGTACTGTAGCTTCAAATCGCAACCGAGCTTCTCCTGCAACCTTATTTGGTCGTATGGCATATGGTCTTCGATCATCTTCAGTGGGCATGGGAATATCCAGTGGATACAGTGGAATGGTGGGGAAGACAAACAATCAGTCTAAAGTTGAAGCCAAGTACCCAGCACTACTTTTTAAGCAACATCTAGCTGCATGCATCGAAAAATTGTTTGGGATGATACGTGATAATTTGAAGAAAGAAATTAGCCCTTTCTTGCATCTATGCATACAGGCACCAAGATCAGTGAGGGCCAGATCAATAAGAGGGTCATCTAAAAATATTCATTCAAACATTGTTGCAAAACAGCAAGCATCAAGTATTCACTGGCAAAGCATCGTTAATAAGCTAGACCAAACATTGGATATAATGTCGGAAAACCATGTTCCCTCCATGATCATGAGAAAAATCTTCTTACAAGTTTTCTCATTCATAAATGTCCAGCTTTTCAATAGCTTGTTACTACGACGTGAGTGTTGTTCCTTCAGTAATGGAGAGTACTTAAAGTTAGGCCTGCAGGAGTTGGAGCAATGGTGTAACAAAGCTACTGATACGTATGCTGGCTCTTCCTGGGATGAACTTCAACACATAAGACAAGCAGTAGGATTTCTGGTGTTACTTCAGAAGTCCCAGAAAAGTTTGAATGAGATCACAGATGAATTGTGCCCGATTCTAAGCATTCCACAAATATATCGCATAGGCACGATGTTCTGGGACGACAAATATGGAACTCAGGGATTATCATCTGATATAATTGGAAAAATGAGAGTCCTATTGGCAGAAGACTCCATAAACATCCCAAACAACTCTTTCCTGCTTGATGTGGATTCAAGCATACCATTTTCAATGGAAGAAATATGCCGGTCCTTCGGCGAGGACGGTGGGGTTAACCTGTCGGACGTCGACCCGCCACCACTTATAAGACAAAGATCAGATTTCCATTTTCTAGTGCAGCAACTGACTGAATGA | 4512 | 42.04 | MTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGATFGELSPHLFAVADACYRSMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSDTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKSWKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKFKVGDPRTFHYLNQTNCYEVANVDDSREYLETRNAMDVVGINQDEQDAIFRVVAAILHLGNIEFMKGKEVDSSKVKDEKSNYHLRTAAELLMCDVKALEHSLCQRVIVTPDGNITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINSSIGQDPNAASLIGVLDIYGFESFKVNSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTDFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNASQCSFVANLFPPLPEETSKQSKFSSIGTRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDISDGSDEKSACIAICDRMGLKGYQIGKTKVFLRAGQMAELDARRTEILANAVRRIQRQIRTYLTRKEFIALRRATIHMQKLWRGQLARKLYEQMRREAASIRIQKHARAHADRKSYKRLLASAIVIQTGMRAMAARNEYRHRRRTKAAIIVQTEWRRASAISVYKQQQKATLALQCLWRSKVARKELRKLKMAARETGALKEAKDKLEKRVEELTWRLEFEKHLRMDVEEAKGQEVAKLQNALEEMQGQLDEANAAIIREREAAKLAIEQAPPVIKEVPVVDETKLEILRNHNEELEGVVGELKKKIEEFEEKYAEVEKESKARLKEAEEAQLKSMQLRETVERLESNLSSLESENQVLRQQALVAADNESLSEELEALKSKIGSLEAENEVLRNRTVAVEHIVPVPAAGLAESKTLDNGHLIEEEIKSPKEPSTVPIKSTKEQSTVPILAKQGSLTEKQQENHDVLIKCLAEDKRFDKGRPVAACIVYKTLLQWRSFESERTNIFDRIIHTIRSSIESQENISDLAYWLSTSSTLLYLLQSSLKATNTSTVASNRNRASPATLFGRMAYGLRSSSVGMGISSGYSGMVGKTNNQSKVEAKYPALLFKQHLAACIEKLFGMIRDNLKKEISPFLHLCIQAPRSVRARSIRGSSKNIHSNIVAKQQASSIHWQSIVNKLDQTLDIMSENHVPSMIMRKIFLQVFSFINVQLFNSLLLRRECCSFSNGEYLKLGLQELEQWCNKATDTYAGSSWDELQHIRQAVGFLVLLQKSQKSLNEITDELCPILSIPQIYRIGTMFWDDKYGTQGLSSDIIGKMRVLLAEDSINIPNNSFLLDVDSSIPFSMEEICRSFGEDGGVNLSDVDPPPLIRQRSDFHFLVQQLTE | 1503 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 33208856 | 33219030 | - | MELO3C023495.2.1 | Cme01g02524 | 319500 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme01g02524 | 1503 | Gene3D | Kinesin motor domain | 1 | 596 | IPR036961 | - | |
| Cme01g02524 | 1503 | SMART | iq_5 | 786 | 808 | IPR000048 | GO:0005515 | |
| Cme01g02524 | 1503 | SMART | iq_5 | 690 | 712 | IPR000048 | GO:0005515 | |
| Cme01g02524 | 1503 | SMART | iq_5 | 763 | 785 | IPR000048 | GO:0005515 | |
| Cme01g02524 | 1503 | SMART | iq_5 | 715 | 737 | IPR000048 | GO:0005515 | |
| Cme01g02524 | 1503 | SMART | iq_5 | 738 | 760 | IPR000048 | GO:0005515 | |
| Cme01g02524 | 1503 | SMART | iq_5 | 667 | 689 | IPR000048 | GO:0005515 | |
| Cme01g02524 | 1503 | Coils | Coil | 989 | 1016 | - | - | |
| Cme01g02524 | 1503 | Pfam | Myosin head (motor domain) | 1 | 653 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme01g02524 | 1503 | SMART | MYSc_2a | 1 | 666 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme01g02524 | 1503 | Coils | Coil | 849 | 883 | - | - | |
| Cme01g02524 | 1503 | ProSiteProfiles | IQ motif profile. | 787 | 816 | IPR000048 | GO:0005515 | |
| Cme01g02524 | 1503 | ProSiteProfiles | IQ motif profile. | 691 | 720 | IPR000048 | GO:0005515 | |
| Cme01g02524 | 1503 | Coils | Coil | 906 | 982 | - | - | |
| Cme01g02524 | 1503 | CDD | MYSc_Myo11 | 10 | 653 | IPR036018 | - | |
| Cme01g02524 | 1503 | Coils | Coil | 810 | 844 | - | - | |
| Cme01g02524 | 1503 | Gene3D | - | 667 | 717 | - | - | |
| Cme01g02524 | 1503 | Gene3D | - | 718 | 768 | - | - | |
| Cme01g02524 | 1503 | PANTHER | MYOSIN | 1 | 1496 | - | - | |
| Cme01g02524 | 1503 | ProSiteProfiles | IQ motif profile. | 716 | 742 | IPR000048 | GO:0005515 | |
| Cme01g02524 | 1503 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 719 | 816 | IPR027417 | - | |
| Cme01g02524 | 1503 | SMART | DIL_2 | 1317 | 1424 | IPR002710 | - | |
| Cme01g02524 | 1503 | ProSiteProfiles | Myosin motor domain profile. | 1 | 665 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme01g02524 | 1503 | ProSiteProfiles | Dilute domain profile. | 1127 | 1442 | IPR002710 | - | |
| Cme01g02524 | 1503 | Pfam | IQ calmodulin-binding motif | 789 | 808 | IPR000048 | GO:0005515 | |
| Cme01g02524 | 1503 | Pfam | IQ calmodulin-binding motif | 692 | 711 | IPR000048 | GO:0005515 | |
| Cme01g02524 | 1503 | Pfam | IQ calmodulin-binding motif | 671 | 688 | IPR000048 | GO:0005515 | |
| Cme01g02524 | 1503 | Pfam | IQ calmodulin-binding motif | 718 | 737 | IPR000048 | GO:0005515 | |
| Cme01g02524 | 1503 | Pfam | IQ calmodulin-binding motif | 741 | 760 | IPR000048 | GO:0005515 | |
| Cme01g02524 | 1503 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 246 | 535 | - | - | |
| Cme01g02524 | 1503 | Gene3D | - | 186 | 244 | - | - | |
| Cme01g02524 | 1503 | CDD | MyosinXI_CBD | 1078 | 1465 | IPR037975 | GO:0007015 | |
| Cme01g02524 | 1503 | PRINTS | Myosin heavy chain signature | 416 | 444 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme01g02524 | 1503 | PRINTS | Myosin heavy chain signature | 363 | 391 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme01g02524 | 1503 | PRINTS | Myosin heavy chain signature | 26 | 45 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme01g02524 | 1503 | PRINTS | Myosin heavy chain signature | 130 | 157 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme01g02524 | 1503 | PRINTS | Myosin heavy chain signature | 83 | 108 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme01g02524 | 1503 | PANTHER | MYOSIN-12 | 1 | 1496 | - | - | |
| Cme01g02524 | 1503 | Gene3D | - | 373 | 557 | - | - | |
| Cme01g02524 | 1503 | ProSiteProfiles | IQ motif profile. | 739 | 768 | IPR000048 | GO:0005515 | |
| Cme01g02524 | 1503 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 719 | IPR027417 | - | |
| Cme01g02524 | 1503 | Pfam | DIL domain | 1318 | 1421 | IPR002710 | - | |
| Cme01g02524 | 1503 | Gene3D | - | 601 | 663 | - | - | |
| Cme01g02524 | 1503 | ProSiteProfiles | IQ motif profile. | 668 | 695 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme01g02524 | Cme-Chr1:33208856 | Cme05g01814 | Cme-Chr5:27032434 | 0 | dispersed | |
| Cme01g02524 | Cme-Chr1:33208856 | Cme11g02415 | Cme-Chr11:30969291 | 0 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme01g02524 | K10357 | - | csv:101207221 | 2837.37 |