Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02525 ATGGCCTTCGAATCAAACCAAACTCATGAATTCATTTTCCGTTCAAAGCTTCCCGATATTCACATTCCCAATCATCTTCCACTTCACGATTATGTTTTCCAAAATCTCTCCAAATTCGCCTCACGCCCATGTTTGATCAACGGCGCCACCGGGGACGTTTACTCATACTACGACGTTAACCTAACCGCCCGTCGTGTTGCAGCCGGCTTACACAGCCTTGGAATTAAAAAGGGTGACGTCGTCATGAATTTACTTCCCAACTCTCCGGAGTTTGTCTTCACCTTCCTTGGTGCGTCGTACCGCGGCGCCATCATGACGGCAGCCAACCCTTTTTACACTGCCGTGGAAATTGCCAAACAGGTCAAAGCCGCCAATGCGAAATTAATCGTGACTATGGCTTGCTTTTACGATCGGGTTAAGGATTTGGCTGAAAATGGTGTCAAAATAGTATGTGTTGATTTTTCTGTTGAGGGTTGTTTGCATTTCTCTGTTTTGAGTGGAGCTGATGAATCTCTCATGCCACGAGTGGATTTTTCCTCCGATGATGTGGTGGCGCTACCGTACTCCTCTGGGACTACCGGTTTGCCAAAGGGAGTTATGTTGACTCATAAAGGGTTAATCACAAGTGTGGCTCAACAAGTCGACGGCCAAAATCCGAACCTATATTATCGTGGCGATGATGTAATCCTCTGTGTACTGCCACTTTTCCATATCTATTCACTCAATTCGATTTTGCTTTGTGGGCTACGCGCCGGTGCTGCGATTACGATTATGCAAAAGTTCGACATCGTTTCACTTTTTCAATTGATTGGGAAATACAAAGTTTCGATTGTGCCCATCGTGCCGCCAATCTTTTTGGCCATTGCTAAGTCACCTGAATTTGAAAAATACGACGTGTCGTCCGTAAGGGTTCTAAAATCCGGCGGAGCGCCACTGGGGAAGGAGTTGGTAGAGGCCGTGAAGGCGAAATTTCCAGCGGCGATTCTCGCACAAGGGTACGGAATGACTGAGGCCGGTCCGGTACTAACCATGAGTTTGGCTTTTGCAAAAGAACCGTTTCAAGTGAAAGCCGAAGCTTGCGGAACTGTGGTCAGAAATGCAGAGATGAAGATAGTGGACCCGGAAACCGGCGCCTCCTTGCCGGAAAATTCCCCGGGTGAGATTTGTATTAGAGGAGATCAAATCATGAAGGGATATTTGAATGATTTGGAGTCAACCAAGAGGACTATTGATAAAGAAGGATGGCTTCACACCGGTGACATCGGCTTCGTCGATGACAACAATGAGCTCTTCATTATCGACCGACTTAAGGAGCTTATCAAGTTCAAGACATTTCAAGTGGCACCCGCCGAACTGGAAGCCCTTCTTATCGCTCACCCAAAACTACGTGACGCGGCTGTTATTGGTATGCCGGATGTGGAGGCGGGAGAAGTACCGGTGGCGTTCGTGGTGGAGGAGAAGAGTGGTGCAACAACAGAGGAAGAAGTAAAACAGTTCGTAACAAAACAAGTAGTGTTCTACAAGAGACTAAAACGTGTGTTTTTTGTCAACGCTATTCCAAAGGCGCCATCTGGCAAAATCCTTAGGAAAGAACTAAGGGCAAAATTGGCATCCGGCGCTTACAATTAA 1629 46.96 MAFESNQTHEFIFRSKLPDIHIPNHLPLHDYVFQNLSKFASRPCLINGATGDVYSYYDVNLTARRVAAGLHSLGIKKGDVVMNLLPNSPEFVFTFLGASYRGAIMTAANPFYTAVEIAKQVKAANAKLIVTMACFYDRVKDLAENGVKIVCVDFSVEGCLHFSVLSGADESLMPRVDFSSDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGQNPNLYYRGDDVILCVLPLFHIYSLNSILLCGLRAGAAITIMQKFDIVSLFQLIGKYKVSIVPIVPPIFLAIAKSPEFEKYDVSSVRVLKSGGAPLGKELVEAVKAKFPAAILAQGYGMTEAGPVLTMSLAFAKEPFQVKAEACGTVVRNAEMKIVDPETGASLPENSPGEICIRGDQIMKGYLNDLESTKRTIDKEGWLHTGDIGFVDDNNELFIIDRLKELIKFKTFQVAPAELEALLIAHPKLRDAAVIGMPDVEAGEVPVAFVVEEKSGATTEEEVKQFVTKQVVFYKRLKRVFFVNAIPKAPSGKILRKELRAKLASGAYN 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 33228398 33230102 - MELO3C023494.2.1 Cme01g02525 319501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02525 542 Pfam AMP-binding enzyme 35 442 IPR000873 -
Cme01g02525 542 Gene3D - 3 436 IPR042099 -
Cme01g02525 542 SUPERFAMILY Acetyl-CoA synthetase-like 9 538 - -
Cme01g02525 542 Gene3D - 437 538 IPR045851 -
Cme01g02525 542 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Cme01g02525 542 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Cme01g02525 542 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 7 537 - -
Cme01g02525 542 CDD 4CL 22 532 - -
Cme01g02525 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 537 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02525 Cme-Chr1:33228398 Cme01g02527 Cme-Chr1:33243310 0 dispersed
Cme01g02525 Cme-Chr1:33228398 Cme01g02526 Cme-Chr1:33235376 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02525 K01904 - csv:101218595 1025.0