Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02527 ATGGCCTTCGAATCAAACCAAACTCAGGAATTCATTTTCCGTTCAAAGCTTCCCGACATTCACATTCCCAATCATCTCCCACTTCACCAATACGTTTTCCAAAATATGCCCAAATTTGCCACCCGCCCCTGTTTGATCAATGGCGCCACCGGCGATGTTTACACTTACCATGACGTTCAGCTTACGGCTCGTCGAGTTGCTGCCGGCCTACACAATCTTGGTATTAAGAAGGGTGATGTTGTCATGAATTTACTTCCCAATTCCCCGGAGTTTGTCTTTACTTTCCTCGGCGCGTCTTACCGGGGTGCCATCATGACGGCGGCAAACCCTTTTTATACGGCTGTGGAAATTGCTAAACAGGCCAAAGCTGCCAATGCGAAATTGATTGTGACCATGGCTTGTTTTTATGATCGGGTTAAGGATTTGGCTGAAAACGGTGTTAAAATTGTGTGTGTTGATTTTGCCGTTGAGGGTTGTTTGCATTTCTCTGTTTTGAGTGGAGCTGATGAATCCCTTGCACCGGTGGTGGATTTTTCCTCTGATGACGTGGTGGCGTTGCCGTACTCCTCCGGCACAACCGGTTTGCCGAAGGGAGTTATGTTGACGCATAAAGGGTTAATCACAAGTGTGGCTCAACAAATGGACGGCGAAAATCCGAACCTCTATTATCACGCCGATGATGTGATCCTCTCTGTGTTGCCGTTTTTTCACATCTATTCACTCAATTCAATTTTGTTGTGTGGGTTACGTGTTGGCGCTACGATTTTGATAATGCAGAAATTTGACATTGTTTCGCTCCTACAATTGATCGAGAAACACAAAATTTCCATCATGCCAATTGTGCCGCCGATCTTTTTGGCCATTGCTAAGTCACCGGAATTTGAGAAATACGACGTGTCGTCCGTGAGGGTTCTCAAATCCGGTGGAGCTCCACTGGGGAAGGAATTGGAAGACGCCGTGAGGGAGAAATTTCCAACGGCAGTTCTCGGACAAGGGTATGGAATGACCGAGGCTGGTCCCGTTCTATCCATGAGTTTGGCTTTTGCAAAAGAACCATTTCAAGTAAAAGCCGGAGCATGTGGAACAGTGGTCCGCAATGCAGAGATGAAGATTGTTGACACCGAAACCGGCGCCTCATTGCCGGCGAATTCTTCCGGAGAAATTTGTATTAGGGGCGATCAAATCATGAAAGGATATTTGAATGATTTGGAGTCAACAAAGAGGACTGTTGACAAAGAAGGATGGCTTCACACCGGTGACATTGGCTTCGTGGACGACGACGACGAGCTCTTCATCGTCGACCGCCTTAAAGAGCTTATCAAATTCAAGGCCTTTCAAGTGGCTCCCGCGGAGCTAGAGGCTCTTCTTATTACACATCCTAAACTATCTGATGCTGCCGTCATTGGTTTCATTTCTAATCAAACTTTATTTTTCTTATTGTTTTTTTTAGTATGCCGGATGTGGAGGCAGGAGAAGTGCCGGTGGCGTTTGTGGTGA 1497 46.49 MAFESNQTQEFIFRSKLPDIHIPNHLPLHQYVFQNMPKFATRPCLINGATGDVYTYHDVQLTARRVAAGLHNLGIKKGDVVMNLLPNSPEFVFTFLGASYRGAIMTAANPFYTAVEIAKQAKAANAKLIVTMACFYDRVKDLAENGVKIVCVDFAVEGCLHFSVLSGADESLAPVVDFSSDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQMDGENPNLYYHADDVILSVLPFFHIYSLNSILLCGLRVGATILIMQKFDIVSLLQLIEKHKISIMPIVPPIFLAIAKSPEFEKYDVSSVRVLKSGGAPLGKELEDAVREKFPTAVLGQGYGMTEAGPVLSMSLAFAKEPFQVKAGACGTVVRNAEMKIVDTETGASLPANSSGEICIRGDQIMKGYLNDLESTKRTVDKEGWLHTGDIGFVDDDDELFIVDRLKELIKFKAFQVAPAELEALLITHPKLSDAAVIGFISNQTLFFLLFFLVCRMWRQEKCRWRLW 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 33243310 33245115 - MELO3C023493.2.1 Cme01g02527 319503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02527 498 Gene3D - 5 436 IPR042099 -
Cme01g02527 498 CDD 4CL 22 470 - -
Cme01g02527 498 Gene3D - 437 491 IPR045851 -
Cme01g02527 498 Pfam AMP-binding enzyme 37 442 IPR000873 -
Cme01g02527 498 SUPERFAMILY Acetyl-CoA synthetase-like 10 483 - -
Cme01g02527 498 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 470 - -
Cme01g02527 498 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Cme01g02527 498 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 7 470 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02525 Cme-Chr1:33228398 Cme01g02527 Cme-Chr1:33243310 0 dispersed
Cme01g02527 Cme-Chr1:33243310 Cme04g01757 Cme-Chr4:25168974 0 dispersed
Cme01g02526 Cme-Chr1:33235376 Cme01g02527 Cme-Chr1:33243310 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02527 K01904 - csv:101218121 907.901