Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme01g02546 | ATGCAACATCATGTGGCAGACGGATTCTCCGGTCTTCACTTCGTCAACACGTGGTCCGACATGTCGCGTGGCCTCGACCTCAAGCTACAACCTTACATCGACCGGAGCCTCCTCCGCGCACGCGACCCACCTCAACCGGCTTTTCGACATATCGAATACCAACCAGCACCAGCCATGAAAAACCCGGTCCAAGCCGACCCGGAAGGAACCACCGTCTCCATATTCAAATTCACCCGGGAACAGCTTAATCTACTCAAAGCCAAATCCAAAGAAAACGGCAACACCATCAACTACAGCTCCTACGAGATGCTCTCCGGCCACGTATGGCGATGCACGTGCAAGGCGCGTGAACTCCCGGACGATCAAGACACTAAGCTATATATCGCCACCGACGGCCGTGCCCGATTACGCCCGCCCCTACCCAACGGCTACTTCGGCAATGTCATCTTCACAGCGACGCCGCTCGCCGTCGCCGGCGAACTAATGTCGAATCCGACGTGGTTCGCCGCCGGTAAGATCCACGACGCCTTGACTCGGATGGACAACGATTATTTGAGATCGGCTTTGGATTATCTCGAGATTCAGCCGAATATATCGGCGTTGGTCCGTGGTGCTCATACATTCCGATGCCCTAATTTGGGAATCACAAGCTGGGTCCGGCTGCCGATTCACGACGCCGATTTTGGGTGGGGCCGGCCTATTTTTATGGGCCCCGGCGGAATCGCATATGAGGGATTGTCGTTTATAATCCCGAGTGCTTCCGACGATGGCAGCTTGTCGGTGGCGATTTCACTGCAGAATCGACATATGAAGGTGTTTGAGAAGCTGTTCTTTGATATTTGA | 843 | 54.45 | MQHHVADGFSGLHFVNTWSDMSRGLDLKLQPYIDRSLLRARDPPQPAFRHIEYQPAPAMKNPVQADPEGTTVSIFKFTREQLNLLKAKSKENGNTINYSSYEMLSGHVWRCTCKARELPDDQDTKLYIATDGRARLRPPLPNGYFGNVIFTATPLAVAGELMSNPTWFAAGKIHDALTRMDNDYLRSALDYLEIQPNISALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSASDDGSLSVAISLQNRHMKVFEKLFFDI | 280 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 33421371 | 33422476 | - | MELO3C027219.2.1 | Cme01g02546 | 319522 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme01g02546 | 280 | Gene3D | - | 59 | 280 | IPR023213 | - | |
| Cme01g02546 | 280 | PANTHER | TRICHOTHECENE 3-O-ACETYLTRANSFERASE | 1 | 279 | - | - | |
| Cme01g02546 | 280 | PANTHER | SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE | 1 | 279 | - | - | |
| Cme01g02546 | 280 | Pfam | Transferase family | 1 | 275 | - | - | |
| Cme01g02546 | 280 | Gene3D | - | 1 | 55 | IPR023213 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme01g02546 | Cme-Chr1:33421371 | Cme08g01990 | Cme-Chr8:25026862 | 2.48E-57 | dispersed | |
| Cme08g02511 | Cme-Chr8:32003547 | Cme01g02546 | Cme-Chr1:33421371 | 8.96E-20 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme01g02546 | K13065 | - | csv:101214857 | 565.074 |