Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme01g02547 | ATGATCATCACCGTCAAGGATTCGACTATGGTGACTCCGGCGGAGGAGACGCCGCATCGGAGTCTCTGGAATTCCAACGTCGACCTCGTGGTTCCGAGTATGCATACCCCGAGCGTCTACTTCTACCGACCTACCGGCGCTTCTAATTTCTTCGACGTCGAAGTTCTCAAGGAAGGTCTAAGCAAGGCGCTGGTTCCGTTTTATCCAATGGCTGGACGGTTGAGACGCGATGAAGACGGTCGAATCGAGATCTATTGTAATGCAGAAGGTGTGCTTCTTGTTGAGGCTGAGACCACGGCGGTTATTGACGATTTTGGTGATTTTGCACCGACGTTGCAGCTTCGGCAGCTTATTCCGGCCGTCGATTACTCCGGTGGAATTGAATCGTATCCTTTGCTGGTGTTGCAG | 408 | 52.21 | MIITVKDSTMVTPAEETPHRSLWNSNVDLVVPSMHTPSVYFYRPTGASNFFDVEVLKEGLSKALVPFYPMAGRLRRDEDGRIEIYCNAEGVLLVEAETTAVIDDFGDFAPTLQLRQLIPAVDYSGGIESYPLLVLQ | 136 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 33423973 | 33424466 | - | MELO3C023474.2.1 | Cme01g02547 | 319523 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme01g02547 | 136 | Gene3D | - | 1 | 136 | IPR023213 | - | |
| Cme01g02547 | 136 | Pfam | Transferase family | 2 | 136 | - | - | |
| Cme01g02547 | 136 | PANTHER | TRICHOTHECENE 3-O-ACETYLTRANSFERASE | 4 | 136 | - | - | |
| Cme01g02547 | 136 | PANTHER | SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE | 4 | 136 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme01g02547 | Cme-Chr1:33423973 | Cme08g01990 | Cme-Chr8:25026862 | 2.30E-22 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme01g02547 | K13065 | - | csv:101214857 | 270.011 |