Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02556 ACATTCTTCTTCCTTCCTTTTCAACTTTTTCCTTATTTTCTCTCTGTTCCACCGAACCTTTTCCACTTACTTACACGCATTCTCTCCAATCCAATAACCATCATGCCGGTTGACACTTCTTCATCTCACCCCTCCACCGTATGCGTCACCGGCGCCGGTGGCTTCATTGCCTCTTGGATCGTCAAACTCCTCCTCCAGAAAGGCTATTTCGTAAGAGGAACTCTCAGAAATCCAGAGGATCCGAAGAACAGGCATTTGAGAGAACTCGAAGGTGCGGGGGAGCGGTTGAGTTTGTATAAAGCGGATCTTCTTGATTTCGAAAGCCTTAAAGCGGCGATCGACGGCTGCGATGGCGTTTTCCATACGGCATCGCCTGTGACTGACGATCCGGAGCAAATGGTGGAACCAGCGGTCAACGGCACAAAGAACGTCATAATCGCGGCGGCCGAAGCCAATGTCCATCGCGTGGTGTTCACTTCCTCTATCGGTGCTGTCTACATGGACCCTAACCGTGGTCCAGACGACATCGTAGACGAGTCCTGTTGGAGCGATCTCGAGTTCTGCAAGAACACAAAGAATTGGTATTGTTATGGCAAAGCTGTGGCGGAGCAGGCGGCATGGGAGGTTGCGAAGGAGAAGGGGGTGGATTTGGTGGTGGTGAATCCAGTGCTGGTGCTAGGGCCATTGTTGCAATCCACCATTAACGCGAGCATAATTCATATACTGAAATACTTGACTGGATCGGCCAAGACTTACGCCAATTCCGTTCAGGCATATGTGCATGTGAAGGATGTGGCTCTAGCTCATATCCTTGTGTACGAGACTCCCTCCGCCGCCGGCCGGTACCTGTGCGCCGAGAGTGTGCTTCATAGAGGGGAGGTTGTTGAGATTCTGGCCAAATTGTTCCCGGAATATCCTATTCCTACCAAGTGCTCAGATGAAGTGAACCCAAGGAAGAAAGCATACAAATTCTCAAACAAGAAGCTGAAGGAGTTGGGATTGGAGTTCACTCCAGCAAAGCAGTGTCTATACGACACCGTTAAAAGCCTACAAGAGAAAGGTCATCTCCCAATTCCCACTTCTACTCAACCAGCAGATTCCATTCAAATTCAATCTTGA 1119 49.69 TFFFLPFQLFPYFLSVPPNLFHLLTRILSNPITIMPVDTSSSHPSTVCVTGAGGFIASWIVKLLLQKGYFVRGTLRNPEDPKNRHLRELEGAGERLSLYKADLLDFESLKAAIDGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEANVHRVVFTSSIGAVYMDPNRGPDDIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKGVDLVVVNPVLVLGPLLQSTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYETPSAAGRYLCAESVLHRGEVVEILAKLFPEYPIPTKCSDEVNPRKKAYKFSNKKLKELGLEFTPAKQCLYDTVKSLQEKGHLPIPTSTQPADSIQIQS 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 33487740 33492822 - MELO3C023465.2.1 Cme01g02556 319532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02556 372 Pfam NAD dependent epimerase/dehydratase family 47 278 IPR001509 -
Cme01g02556 372 Gene3D - 37 371 - -
Cme01g02556 372 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 42 360 - -
Cme01g02556 372 CDD FR_SDR_e 47 334 - -
Cme01g02556 372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 40 351 IPR036291 -
Cme01g02556 372 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 42 360 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02556 Cme-Chr1:33487740 Cme04g01730 Cme-Chr4:24865012 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02556 K09753 - csv:101213412 650.973