Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02660 ATGGCTACTGCGACTGAAGAAGAGGTTGATTATGAGAGTGATCCGGAAGAAGGGAAGCGGTCACTGGCGATGCGGAGGCGGGAGGCGAGTGATGATGAGGAGGGTGAAGGAGAAGGGGGAGAAGGGAGGAGGACGATACGGAGGATGGGGATTCATTCGGATGATTCGGATGGTCAAGGTGGAGCTGCGGAGTACGACGATGAGGATGAATTGGGGGAAGATGTAGATGAAGATGAGGTTGGTGAAGGAGTTGAGGATGTTGATGAGGGGGAGGAAGTTGAGGATGAGGATAATGAGGAGAGGTATGAGGAGAGGAAGTCGGGCGATCGTGTTGAATTGGATGCTGCCTCCGGCAATGTAGCGAAGGAGTTGGATGATGATGGAAGACCGTTACCTGAAGAACAAACTGATTTGCACGAGGAAAATTTAGAAGGGGAATTTGATGAGGAGAAGAAGGTGAATGAGCCCTTCGCTGTTCCCACTGCCGGGGCTTTCTATATGCATGATGATCGGTTTAGAGACAATGCAGGCGGTCGACACAGGAGAACACATGGTGGAAGGAGGTTGTGGGAGTCCAAGGATGACATGAAATGGGGTCATGACAAGTTTGAAGAAATGACTTTGCAAGAAAGAAATCGTGATGAGAGGAGAACTTCCAAGGGTCACCCACGAGGTCGGGGTAAAAGTAGAGGCATGGATCATGGTTATGCTCGAGGGAACAGATCTCGAGCATACAATAAAAATAACATTCAGAACAATGCTGCTCCTAAAGTTGTGAGAGGAAGAGGACCTAGACGGTATGAACCAACTATGAACAACAATGCCATATCTTCTCCTTCACAAGAAAAACAATCTGTGAAGCCTCTTGAGAAAGCGTCTTATAATAATACAGGGAGATCCCTTGCACCCTCTCCAAACATCGAAGGTGAGCAAATCTCTGTTAGGAAACATGCCTTTGCATCAAGCCTGAATTCTGCTTCTCCGCCTTTCTACCCTTCAGGGACGTCTAGTAAGAACATCCCTAAAGTGGAAAAAAACGAAGTACAAGCTGGACTTCCTGAAAAGAATATGTATGATGATACTCGCTCTTTGCCACAATCAAGTGTAATGGTAGATGGAAAGCATGTAGTTGATACTGTTGCCATGGAGAGGGTTTACATAAATGATTCAACCAATCCATCTCTAGGAAATCCTTTATCCAAGCCATCTTCTGGTTCTTCTGTGGTCAATAATGCTCAAATTCCCCAATCTAGACCTCATGGAAGGGGTGCTGCTGTAGGACCAACTGGCTACCCTCCTGCATCACTCCATAGCCAAGTTAACAAGGTCTCTTTACCTGCTCAATCACATGGTGTAGCACGAACTCCTGGTCAAACTAGGGTTCAGTCTGCCATTCAGGTTCCTGTCCAGCAGTTGGGTCAGCGACCTGGTAGTGGATCTCAGTCTTCATCTCCACCAAAAACTTCCACTTCAGTTAACTCACTTGAATCTGGAGAGGGTGATTCCTCTTCAGAATCAAGCAAATTGAAAACTGCTTTGGTTGGAAAGGGGAAGGGTGTTGCCCAGGGTATTGGTGCCGGTTCTTTCATTTATGGTGGGGCCCAGATGATGGGAACTTCAGGGAACATGAATATTACTCATGGAGACCAAAACTTCCCTCATACTCCAGCATTTTTGCCAGTTATGCAATTTGGAGGTCAGCATCCTGGTGGCATTGGAGTTCCTGCCGTTGGCATGGCATTTCCAGGATATGTTGCTCAGTCCCAACTTGGCATGGGAAATTCAGAAATGACATGGTTACCAGTTTTGGCTGGTGCAGCTGGGGCTTTGGGAGCTACATATTGTTCGCCTTATTTAGCTATGGATGGGGCTTATCATGCTCGACCCTCAGGACAGACATCATCTGCAGGAATGTTGAGATGGCAAAAACGTAGTTATGGTATAACTGATCTTTCTCCTTTGCAGAACTCGAAAGTGATGATGTTGGACAACGACAAAATAAGCCACGCAGACCTCCTCACCCAGGAGGGAATGGAGATTAAAGAAAAGAAGAGAACTTCAACTATCTCCTCTCCATTAATGTCATCTTCTTCGATGGCTATCCTCCTGGTTTTTCTCTGTTGCATTTTTAACTGTCCAAACATCGCATTTGCTGCCGGCCCCGGTGGTCCCTTCATTCCCAAAGATAATTTTCTCATTGACTGTGGTGCCAACAAGGAACTTGGTGCACTCCCTGATGGAAGAGTTTTCAAAACTGATGAGCAATCCAAGCAATTCTTAGATGCCAAGGATGACATTATAGCAACTGCTACGCCGGAGATGAAGGCACCGTCGCCAGTCGATTTGACAGCCAGAGTCTTCCTCCAAGAAGCTACTTACATCTTTCAAATGGCAGAGCCTGGATGGCATTGGCTACGCCTACATTTCCTTCCTGTTAAAAGCAATGACTTTGATCTCTTGCAAGCCAAATTTTCAGTGGTTACTGAAAAGTATGTGTTGCTTCATAGCTTCAACATCAACAATGAATCCACATTTGTTCTCAAGGAGTTTCTCCTCAATATCACTGAACCAAAACTCTCAATCAAGTTCTTGCCTATGAAGAATTCAGCTGCTTTCATCAACGCCATCGAGGTCGTCTCGGCTCCTGTGGACTTGATTGCTGATTCGAACGTGGAGTTGTCTCCAGTTGGAACTATTGAGGGCCTGACGAAATATGCATTTCAGACACTGTACAGGTTAAACATGGGAGGTCCTACAATTACTCCAAGAAATGACACTCTTGGGAGGACATGGGAGACAGATGAAGTTTTTAGGACACCGAAAGCTGCTGGTCAGAGTGTGGTTGTTCAGACCAATAGCATCAAATACCAAGGAGGATTGAAAGAAACAGGCATGTTAATTGCTCCTCCAAGTGTGTATGCAAGTGCAGTTCAAATGGGAGATGCTCAAGTTAGTATACCAAATTTCAATATCACATGGAAATTTGAAGCAGATCCCTCATTTGGGTATCTAGTTCGCTTCCATTTTTGTGATATTGTCAGCAAAGTACTCAATGATATCTATTTCAATGTTTATGTAAATGGGAAAGCTGCTATAACCAACTTGGATTTGTCACACAAGCTAGGAAGTTTGGCAACTGCATATTACAAGGATGTTGTGGTTAATGCTTCCTTGATTGTAGATGGACTGACAATTCAAATTAGTCCGGCTAATGTCGAGACCGGTGATATGAATGCCATTCTAAATGGTATAGAGGTATTGAAAATAAGCAATTCTGTTAATAGTTTGGATGGAGAGTTTGGAGTGGATGGTAAGTCTGCAAATGGATCTAACCGTGGGACAGTAGCTGCCGTTGGGTTTGCGATGATGTTTGGAGCGTTTGTTGGGCTCGGTGCAATGGTGATGAAATGGCATAAAAGGCCTCAAGATTGGCAGAAGAGGAACAGTTTCTCTTCTTGGTTGCTTCCTGTACATGCTGGTGATTCAAGCTTTATGACAAGCAAGACTTCATATGGATCACATAAGACCAACATTTATTCCTCTACTTTAGGCCTTGGTAGGTTCTTTACTTTGGCAGAACTTCAAGAAGCCACCAAGAACTTTGATCCCAATTCAATAATTGGTGTTGGTGGGTTTGGAAATGTGTACCTTGGAGTGATTGATGAAGGAACTAAAGTAGCAGTTAAGAGAGGAAATCCACAATCTGAACAAGGCATTACAGAATTCCAAACAGAAATTCAAATGCTTTCAAAACTTAGACATAGGCATTTGGTTTCTTTGATTGGGTACTGTGATGAAAATGCTGAAATGATCTTGGTATATGAGTTCATGTCAAATGGTCCATTCAGAGATCACTTATATGGAAAGGACTTATCTCCACTGTCATGGAAGCAAAGGCTGGAGATTTGTATCGGGGCAGCTCGAGGTCTCCATTACCTGCACACTGGAACAGCACAAGGAATCATTCACCGTGATGTCAAAACAACCAACATTTTACTCGACGAAAACTTCACCGCAAAAGTCGCCGATTTTGGATTGTCAAAGGATGCTCCAATGGGGCAAGGACATGTCAGTACAGCAGTGAAGGGAAGTTTTGGATATTTGGATCCAGAGTACTTTAGGAGACAACAGTTAACAGAAAAATCAGATGTTTATTCCTTTGGAGTTGTTCTACTTGAGGCTTTGTGCGCAAGGCCAGCAATCAACCCATCTTTGACAAGAGAACAAGTGAACTTAGCTGATTGGGCAATGCAATGTAAGAAAAAAGGGTGTTTGGAAAAGATAATGGATCCACTTCTAGTTGGAGCTATAAATCCTGAGTCGATGAAAAAGTTTGCTGAAGCAGCAGAGAAATGTCTAGCTGAACATGGTGTAGATAGGCCAAGCATGGGGGATGTATTGTGGAATTTGGAGTATGCATTACAACTACAAGAAGCATTCTCACAAGGCAAGACCGAAGACGAAAACGGAGCTGCAAGTACAACGGCAACTGTCGCCCCGGCTACACCTCGCACTGTCGAAGCTTCAACAAATGCATCCGACAACCGCCCTGTCGTGCAGCCAGAACAGAATAGGCAACCAGCAGAGGTTCAAGCCATTGATGATCATTCAGGAAGTGCAATGTTTGCTCATTTTTCTAATCTCAATGGTAGATGA 4656 44.37 MATATEEEVDYESDPEEGKRSLAMRRREASDDEEGEGEGGEGRRTIRRMGIHSDDSDGQGGAAEYDDEDELGEDVDEDEVGEGVEDVDEGEEVEDEDNEERYEERKSGDRVELDAASGNVAKELDDDGRPLPEEQTDLHEENLEGEFDEEKKVNEPFAVPTAGAFYMHDDRFRDNAGGRHRRTHGGRRLWESKDDMKWGHDKFEEMTLQERNRDERRTSKGHPRGRGKSRGMDHGYARGNRSRAYNKNNIQNNAAPKVVRGRGPRRYEPTMNNNAISSPSQEKQSVKPLEKASYNNTGRSLAPSPNIEGEQISVRKHAFASSLNSASPPFYPSGTSSKNIPKVEKNEVQAGLPEKNMYDDTRSLPQSSVMVDGKHVVDTVAMERVYINDSTNPSLGNPLSKPSSGSSVVNNAQIPQSRPHGRGAAVGPTGYPPASLHSQVNKVSLPAQSHGVARTPGQTRVQSAIQVPVQQLGQRPGSGSQSSSPPKTSTSVNSLESGEGDSSSESSKLKTALVGKGKGVAQGIGAGSFIYGGAQMMGTSGNMNITHGDQNFPHTPAFLPVMQFGGQHPGGIGVPAVGMAFPGYVAQSQLGMGNSEMTWLPVLAGAAGALGATYCSPYLAMDGAYHARPSGQTSSAGMLRWQKRSYGITDLSPLQNSKVMMLDNDKISHADLLTQEGMEIKEKKRTSTISSPLMSSSSMAILLVFLCCIFNCPNIAFAAGPGGPFIPKDNFLIDCGANKELGALPDGRVFKTDEQSKQFLDAKDDIIATATPEMKAPSPVDLTARVFLQEATYIFQMAEPGWHWLRLHFLPVKSNDFDLLQAKFSVVTEKYVLLHSFNINNESTFVLKEFLLNITEPKLSIKFLPMKNSAAFINAIEVVSAPVDLIADSNVELSPVGTIEGLTKYAFQTLYRLNMGGPTITPRNDTLGRTWETDEVFRTPKAAGQSVVVQTNSIKYQGGLKETGMLIAPPSVYASAVQMGDAQVSIPNFNITWKFEADPSFGYLVRFHFCDIVSKVLNDIYFNVYVNGKAAITNLDLSHKLGSLATAYYKDVVVNASLIVDGLTIQISPANVETGDMNAILNGIEVLKISNSVNSLDGEFGVDGKSANGSNRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNSFSSWLLPVHAGDSSFMTSKTSYGSHKTNIYSSTLGLGRFFTLAELQEATKNFDPNSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEFMSNGPFRDHLYGKDLSPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQCKKKGCLEKIMDPLLVGAINPESMKKFAEAAEKCLAEHGVDRPSMGDVLWNLEYALQLQEAFSQGKTEDENGAASTTATVAPATPRTVEASTNASDNRPVVQPEQNRQPAEVQAIDDHSGSAMFAHFSNLNGR 1551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34060666 34070522 - MELO3C023364.2.1 Cme01g02660 319636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02660 1551 CDD STKc_IRAK 1207 1471 - -
Cme01g02660 1551 MobiDBLite consensus disorder prediction 270 306 - -
Cme01g02660 1551 MobiDBLite consensus disorder prediction 1481 1527 - -
Cme01g02660 1551 MobiDBLite consensus disorder prediction 389 437 - -
Cme01g02660 1551 MobiDBLite consensus disorder prediction 389 417 - -
Cme01g02660 1551 MobiDBLite consensus disorder prediction 119 138 - -
Cme01g02660 1551 ProSiteProfiles Protein kinase domain profile. 1201 1473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme01g02660 1551 PANTHER BNAC03G60370D PROTEIN 715 1520 - -
Cme01g02660 1551 Gene3D - 730 884 - -
Cme01g02660 1551 Gene3D - 905 1091 - -
Cme01g02660 1551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1321 1333 IPR008271 GO:0004672|GO:0006468
Cme01g02660 1551 Pfam Protein tyrosine and serine/threonine kinase 1206 1466 IPR001245 GO:0004672|GO:0006468
Cme01g02660 1551 PANTHER OS07G0166700 PROTEIN 715 1520 IPR045272 GO:0004714|GO:0006468
Cme01g02660 1551 Pfam Malectin-like domain 733 1088 IPR024788 -
Cme01g02660 1551 SUPERFAMILY Protein kinase-like (PK-like) 1185 1468 IPR011009 -
Cme01g02660 1551 MobiDBLite consensus disorder prediction 1481 1533 - -
Cme01g02660 1551 MobiDBLite consensus disorder prediction 204 237 - -
Cme01g02660 1551 ProSitePatterns Protein kinases ATP-binding region signature. 1207 1229 IPR017441 GO:0005524
Cme01g02660 1551 SMART serkin_6 1201 1473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme01g02660 1551 MobiDBLite consensus disorder prediction 1 154 - -
Cme01g02660 1551 SMART Btz_2 116 231 IPR018545 GO:0003729|GO:0006397|GO:0035145
Cme01g02660 1551 MobiDBLite consensus disorder prediction 60 99 - -
Cme01g02660 1551 MobiDBLite consensus disorder prediction 14 54 - -
Cme01g02660 1551 Gene3D Transferase(Phosphotransferase) domain 1 1277 1498 - -
Cme01g02660 1551 Pfam CASC3/Barentsz eIF4AIII binding 133 228 IPR018545 GO:0003729|GO:0006397|GO:0035145
Cme01g02660 1551 MobiDBLite consensus disorder prediction 471 509 - -
Cme01g02660 1551 Gene3D Phosphorylase Kinase; domain 1 1162 1276 - -
Cme01g02660 1551 MobiDBLite consensus disorder prediction 204 306 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02660 Cme-Chr1:34060666 Cme02g01864 Cme-Chr2:25266955 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64637 PF12819 Malectin_like 2.00E-36 CL0202 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02660 - - csv:101220967 1671.75