Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02686 ATGGATTTCTGGCCAGAATTCCTTGCAAGCAGTTGGGGTAGAGAATTTGTCGCCGGTGGATTTGGTGGCATCGCCGGCGTAATCTCTGGCTACCCTCTTGATACTCTTAGAATAATGCAACAACAATCGATATCTGGTTCTGCTTCGAAAATCTTTCGCAATATCATTGCTAACGATGGCCCTGCTGGTCTTTTCAGAGGCATGGCTGCTCCTTTGGCCTCTGTCACTTTTCAGAACGCCGCCGTGTTTCAGATCTATGCCGTTCTTTCTCGGGCATTCAACTCCTCCTCTCAATCCAATGGAGACCCTCCAAGTTATAAGGCTGTTTCATTTGCAGGAGTTGGTACTGGAGCTCTTCAGAGCTTCATCTTGTCGCCGGTGGAGCTTGTGAAGATCCGCCTGCAATTGCAGAGTTCAAGGCATGCAACTTCTTCTTCTTCTTCTTCTTTTTCTCATAGAGGTCCATTGAGCGTCACCAAGAGCATCTACAAAACAGAAGGATTGAGAGGGATTTACAAAGGACTTACCATAACCATACTCAGAGATGCACCTGCACATGGCATCTATTTCTGGACATACGAGTGCATGAGAGAGCAGTTTCATCCTGGCTGCCGAAAGACCGGCCAAGAGAGCGTCGGAACAATGCTGGTCGCCGGAGGGCTTGCCGGAGTTGCTAGCTGGGTTTTTTGTTATCCACTGGATGTATTGAAGACAAGAATTCAGGGTCAAACACAAAGTTCATCTCGAAAGTACAATGGGATTGTGGATTGTCTTAGCAAAAGTGTAAGAGAAGAGGGTTATAGAGTGCTATGGCGTGGACTAGGGACAGCAGTTGCCAGAGCGTTTGTGGTAAATGGGGCCATTTTTGCTGCTTATGAGATAACTTTGAGGTGTTTGTTTAGCAATGGAAGCAATCATAGACAGCAATAA 930 46.67 MDFWPEFLASSWGREFVAGGFGGIAGVISGYPLDTLRIMQQQSISGSASKIFRNIIANDGPAGLFRGMAAPLASVTFQNAAVFQIYAVLSRAFNSSSQSNGDPPSYKAVSFAGVGTGALQSFILSPVELVKIRLQLQSSRHATSSSSSSFSHRGPLSVTKSIYKTEGLRGIYKGLTITILRDAPAHGIYFWTYECMREQFHPGCRKTGQESVGTMLVAGGLAGVASWVFCYPLDVLKTRIQGQTQSSSRKYNGIVDCLSKSVREEGYRVLWRGLGTAVARAFVVNGAIFAAYEITLRCLFSNGSNHRQQ 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34282036 34283612 + MELO3C024239.2.1 Cme01g02686 319662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02686 309 Pfam Mitochondrial carrier protein 211 301 IPR018108 -
Cme01g02686 309 Pfam Mitochondrial carrier protein 110 200 IPR018108 -
Cme01g02686 309 Pfam Mitochondrial carrier protein 11 96 IPR018108 -
Cme01g02686 309 Gene3D Mitochondrial carrier domain 5 112 IPR023395 -
Cme01g02686 309 Gene3D Mitochondrial carrier domain 113 309 IPR023395 -
Cme01g02686 309 SUPERFAMILY Mitochondrial carrier 12 293 IPR023395 -
Cme01g02686 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 199 IPR018108 -
Cme01g02686 309 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 301 - -
Cme01g02686 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Cme01g02686 309 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 301 - -
Cme01g02686 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 298 IPR018108 -
Cme01g02686 309 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Cme01g02686 309 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Cme01g02686 309 PRINTS Mitochondrial carrier protein signature 119 137 IPR002067 GO:0055085
Cme01g02686 309 PRINTS Mitochondrial carrier protein signature 172 190 IPR002067 GO:0055085
Cme01g02686 309 PRINTS Mitochondrial carrier protein signature 219 241 IPR002067 GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme01g02686 Cme04g01097 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02686 Cme-Chr1:34282036 Cme04g00109 Cme-Chr4:864146 4.00E-09 dispersed
Cme01g02686 Cme-Chr1:34282036 Cme04g01097 Cme-Chr4:14974455 4.04E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02686 K15109 - csv:101222165 563.148