Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02763 ATGTGGTGGAGATCGGCCTCTTTCATCCTCGACAAGCAGCAGGCTGAAGGCGCTTCAAAGCCTCCCGAAACCCTTTCCATTTCCCCACCCACGCAATCTTCTATGGCGGATGCATTTCAGAACCCTAACCCTAAAATTTCAGCCTATTACCAAAGTAGAGCTGCCCACACCGCCGTAGTCACCAGTGATTGGCTTGCTCAGGCGCAGGCCGCTGTCGGATTCCAAACCGACGATCAGTTACTGTCGGAAACTGATACCAAGGACTCTGCATCCGGTAAGCCGTTTAGTGTGATTGATGAGTTTAATAACTGGAGGAAACAGCCGGATTTGGCCGAGGCCGTTGCAGCTATTCGGGCTTTGGCGGCCGTCATAAGGTCTAGTCAGGCCACGACTATGATGGAGCTCGAAATTGAGCTGAAAAAGGCTTCAGACTCCCTAAAATCGTGGGATACAACTTCAATATCATTAACAGCTGGCTGTGATTTGTTCATGCGGTATGTTACTCGAACCTCGGCTTTAGAATATGAGGACTTCAAGTCTGCTAAATCTCGCCTGATTGAACGTGCAGAAAAGTTTGGGGAGATATCCTGTAAGGCACGGAGGATTATTGCAATGCTTAGTCAGGATTTCATTTTTGACGGCTGTACAATTTTGGTCCATGGTTTCTCTAGAGTCGTGATGGAAGTTCTGAGGTTGGCTGCACAGAATAAGAAGCTCTTTAGAGTGTTTTGCACAGAAGGAAGACCGGACAGGACAGGTTTGCGTTTATCCAACGAGCTAGCCAAACTTGATGTCCCTGTAAAGCTCCTAATTGACTCAGCAGTAGCATATACAATGGATGAGGTTGATATGGTCCTTGTTGGGGCCGATGGAGTAGTCGAGAGTGGAGGTATAATCAATATGATGGGCACATATCAAATTGCATTAGTGGCACATAGCATGAACAAACCGGTGTACGTGGCTGCTGAGAGTTACAAGTTTGCTAGACTGTACCCATTGGATCAAAAAGACATGGCCCCTGCTCTGCGTCCAATAGATTTTGGGGTTCCAATCCCATCAAAGGTTGAAGTTGAAAAATCTGCTCGAGACTATACTCCTCCTCAATACCTTACCCTTCTCTTTACAGATTTGGGTGTTCTCTCTCCATCTGTGGTGAGTGACGAGCTCATCCAACTATATTTATAG 1185 46.84 MWWRSASFILDKQQAEGASKPPETLSISPPTQSSMADAFQNPNPKISAYYQSRAAHTAVVTSDWLAQAQAAVGFQTDDQLLSETDTKDSASGKPFSVIDEFNNWRKQPDLAEAVAAIRALAAVIRSSQATTMMELEIELKKASDSLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFKSAKSRLIERAEKFGEISCKARRIIAMLSQDFIFDGCTILVHGFSRVVMEVLRLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTMDEVDMVLVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDMAPALRPIDFGVPIPSKVEVEKSARDYTPPQYLTLLFTDLGVLSPSVVSDELIQLYL 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34740775 34744621 + MELO3C024310.2.1 Cme01g02763 319739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02763 394 Gene3D - 94 195 IPR042528 -
Cme01g02763 394 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 38 394 - -
Cme01g02763 394 MobiDBLite consensus disorder prediction 19 33 - -
Cme01g02763 394 Coils Coil 132 152 - -
Cme01g02763 394 MobiDBLite consensus disorder prediction 13 33 - -
Cme01g02763 394 Gene3D - 198 394 IPR042529 -
Cme01g02763 394 SUPERFAMILY NagB/RpiA/CoA transferase-like 110 393 IPR037171 -
Cme01g02763 394 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 38 394 - -
Cme01g02763 394 Pfam Initiation factor 2 subunit family 108 382 IPR000649 GO:0044237
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02763 Cme-Chr1:34740775 Cme09g01157 Cme-Chr9:16221802 9.03E-23 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02763 K03239 - csv:101211420 746.117