Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02766 ATGTGTCTTAGGCTGCTACTTTTCTGCAAACTCGGAAGTGACAGACCAACTTTATGCAAGCTGTTTAATACATATGAATTTGAAGAAATCTTGGCGTATTTGAATCAGTCCATGCATGAGCTTACCAACTGCTTTAATTCTGTTATGCTTCAAGACCTTGCAAAGCAGAAAGAACGACGATATGAATTTAAGGGCGTAAAGGATTCGCCTCTTTGGTGGACTCGAATGTTGATCTTTAAAGCTACGGACTACTTAGGGCTTCTTGCAATCCCTTCTGGGAGTATTCCTGAAGATAAATCTAAGAAGGATAATCCAGAGGATCAACAGAGATATCCCTTTCCACAATTAAATTCTTCTGGGCGTTTGGAGGTCCAGGTTTTGTCAAATCCTAGTAAAGATCAGTTTTGTAGGACTCTTGAATCGTATAAACCGAACATTGTTTACTTACAAGGGGAACAACTCGAGAATGATGAAGTTGGTTCTTTAGTATGGGGAGGTGTTGATTTGTCCACTGTAGAAGCGATAAGTGGGCTCTTTAATTATCCGTTGCTCACCACTGTATATTTGGATATAGCAAAGGGAGATGAAGTAGCTGATGCACTTCACTCCAAGGGTATTCCTTATGTCATATACTGGAGGAGCACATTTACTTGCTATACAGCATGTCATTTTCGTAATGCATTCCTTTCAGTTCTTCAGAGTTCATCTGCTCACACATGGGACGCATTTCAACTTGCACACGCTTCATTTAGGATGTATTGCTTGGGAAACAACTTTGTTCTTCCTAGCAGTAGTCATAAAGAAGTTAGTGAAGATCTGGGTCCACATCTTCTAGGGGAACGCTTGAAAATAAATGTCGAACCCCTCGAGAAAGAGGTAGCTGATGATGAAGAAAGTTCGTCAGAAGGAATTTCTGTGAGTGTTCTTGATAATGATGTTGAAATGAGATTTCTTGTATGTGGAGAACCAGGGTCATTGGATGCTTATGTATTAGAAGCTCTGGAGGATGGTCTTAACGCCCTCTTGGACATTGAAATTCGGGGGAGCAAACTTCACAGCAAGTTCAGTGCCCCTCCTCCACCTCTTCAGGCAGGAACACTCTCTAATGGTGTTGTGACCATGCGCTGTGATTTATCAACATGCAGTTTTGCCCACATTTCATTGTTGGTATCAGGTAGTGCACAAGCTTGTTTTGATGATCAGCTATTTGAAAATTATATAAAGAATGAGATTATAGACAGAGGCGAACTAGTGCAGACACTAATCGATGGTGAAGGAAGCAAACACTTATCTGAACCACGTAAATCTACTTCAATTGCTTGTGGGGCAACGGTTTTTGAAGTTAGCTTGAAGGTTCCTTCATGGGCATCTCAGATTTTGAGGCAGTTAGCCCCTGATGTTTCTTATCGAAGTTTAGTGGGACTGGGCATTGCCAGCATCCAGGGTTTGTCTGTTGCTTCTTTTGAGAAGGATGATGCTGAGCGCCTCCTTTTCTTCTGCTCAAGGAAGGAAAAAGATTTATTTCTGAGCAATTTAACTGATAGCACACTTCCAAGCTGGTTGAAGCCACCTGCTCCTAGAAAGAGATCAAAATATATGAAAGATACAAGCCTTGGTTCTCATGATATTATTGAACATCTGAAGGTATTGCCTGGTAGCAGAATACATAGCGCGAACATGGAAATAGGTTCAAGGAATGGTTTTAGCACTCCCATGTTTCCACTTCCAAGAAGGAGAGGCATGAAAATTGCTGCAATGAGGCCCATTCCTCACGTTAATCGCCATAAAATGATCTCTTTTCATGGAATATCTGAGATGGGAGGGCACAATGGAGGCCTGCTTAAAGCTAGTGTTCCTTCTAGTAATCCCACAAAGCATGTGACTGTAGGTTCAGCTTCAGTTTTCCAACAAAAAGTATTTCCAAGTGCGTCTCAATATAAACAAATCATTCCCATGAATCCACTACCTTTGAAGAAGCACGGTTGTGGCAGAAGTCATATACAGGCTTGCTTTGAGGAGGAATTTTTGAAGGATTTGCTGCAGTTTTTAGCTCTTCGAGGTCACAGTCGACTTATTCCTCCTGGTGGGCTTGCTGAGTTTCCAGATGCTATACTCAATGGAAAGCGTCTTGACCTTTACAACCTGTACAAGGAGGGTGTTGGAAACACGCTTAAAAGACATTACGAGACTTATCTTCTAGAGTATGAATTGGCACATGAAGATGTGGACGGTGAATGTTGCCTGTTATGCCACAGTAGTGCAGCAGGGGACTGGGTGAACTGTGGCTTTTGTGGAGAGTGGGCTCACTTCGGTTGCGATAGAAGGCAGGGTCTCGGTGCATTTAAGGATTATGCAAAAACTGATGGCTTAGAATACATATGTCCACACTGTAGTGTCGCTAATTATAAGAAGAAGAAAGTTGCAAATGGTTTATCTCCAGGCTTCTCCTCAAGACCAATGTGA 2463 42.02 MCLRLLLFCKLGSDRPTLCKLFNTYEFEEILAYLNQSMHELTNCFNSVMLQDLAKQKERRYEFKGVKDSPLWWTRMLIFKATDYLGLLAIPSGSIPEDKSKKDNPEDQQRYPFPQLNSSGRLEVQVLSNPSKDQFCRTLESYKPNIVYLQGEQLENDEVGSLVWGGVDLSTVEAISGLFNYPLLTTVYLDIAKGDEVADALHSKGIPYVIYWRSTFTCYTACHFRNAFLSVLQSSSAHTWDAFQLAHASFRMYCLGNNFVLPSSSHKEVSEDLGPHLLGERLKINVEPLEKEVADDEESSSEGISVSVLDNDVEMRFLVCGEPGSLDAYVLEALEDGLNALLDIEIRGSKLHSKFSAPPPPLQAGTLSNGVVTMRCDLSTCSFAHISLLVSGSAQACFDDQLFENYIKNEIIDRGELVQTLIDGEGSKHLSEPRKSTSIACGATVFEVSLKVPSWASQILRQLAPDVSYRSLVGLGIASIQGLSVASFEKDDAERLLFFCSRKEKDLFLSNLTDSTLPSWLKPPAPRKRSKYMKDTSLGSHDIIEHLKVLPGSRIHSANMEIGSRNGFSTPMFPLPRRRGMKIAAMRPIPHVNRHKMISFHGISEMGGHNGGLLKASVPSSNPTKHVTVGSASVFQQKVFPSASQYKQIIPMNPLPLKKHGCGRSHIQACFEEEFLKDLLQFLALRGHSRLIPPGGLAEFPDAILNGKRLDLYNLYKEGVGNTLKRHYETYLLEYELAHEDVDGECCLLCHSSAAGDWVNCGFCGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSVANYKKKKVANGLSPGFSSRPM 820
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34752883 34759488 + MELO3C024313.2.1 Cme01g02766 319742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02766 820 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 718 809 IPR042293 -
Cme01g02766 820 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 86 720 IPR042293 -
Cme01g02766 820 CDD PHD_ARID4_like 746 797 - -
Cme01g02766 820 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 718 809 - -
Cme01g02766 820 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 86 720 - -
Cme01g02766 820 SUPERFAMILY FYVE/PHD zinc finger 730 802 IPR011011 -
Cme01g02766 820 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 733 806 IPR013083 -
Cme01g02766 820 SUPERFAMILY ARID-like 672 751 IPR036431 GO:0003677
Cme01g02766 820 MobiDBLite consensus disorder prediction 96 115 - -
Cme01g02766 820 CDD ARID 672 736 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme01g02766 Cme04g01382 CCT
Cme01g02766 Cme04g01382 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02766 Cme-Chr1:34752883 Cme04g01382 Cme-Chr4:19635342 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02766 - - csv:101214243 1419.06