Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02767 ATGGCTGTTCTTCTTCGAGCATTCTTTCTCTTTTCTCTCCTCATTCCATTTTCTTCGTCTTCTTCGATTGATGCTTCAAAGAAAACCTTCATTGTACAGGTTCACAAAGATTCCAAGCCTTCTATTTTCCCAACCCACAAGCACTGGTATGAGTCCTCTTTAGCATCCATCTCTTCTGTCAATGATGGAGGAGCCATCATCCATACATATGAAACTCTTTTCCATGGCTTCTCTGCTAAGCTCTCACCTCTTGAAGTTGAGAAGCTTCAAACTCTCCCCCACATCGCTTCCATCATCCCTGAACAGGTTCGTCATCCTCACACAACTCGTTCCCCCGAGTTTCTTGGCCTTAAGACATCTGATAGTGCTGGCTTGCTTAAAGAGTCCGACTTTGGATCTGACCTTGTAATTGGTGTTATTGATACTGGTATTTGGCCGGAGAGGCAGAGTTTTAACGACCGCGATCTGGGTCCTGTTCCTTCCAAATGGAAAGGTCAGTGTTTGGTGGCTAAAGACTTTCCAGCTAGCTCTTGCAACCGTAAACTCATTGGGGCTCGATTTTTCTGTAGTGGGTACGAGGCTACCAATGGAAAGATGAATGAAACCACCGAGTATCGCTCGCCGCGAGATTCCGATGGCCATGGTACACATACAGCGTCCATTGCCGCAGGTCGTTATGTGTTTCCAGCTTCAACTTTGGGGTATGCTCGTGGCAAAGCTGCTGGAATGGCTCCTAAAGCCCGTCTTGCTGCTTATAAAGTATGCTGGAACGCCGGCTGTTACGACTCCGACATTCTTGCTGCTTTTGATGCTGCCGTTTCCGACGGTGTCGATGTTGTATCACTCAGCGTCGGCGGTGTGGTTGTGCCGTACTATCTCGATGCCATCGCTATTGGAGCTTATCGAGCGGTGGCTGCCGGTGTTTTTGTCTCCGCATCGGCCGGTAATGGTGGTCCAGGTGGGCTCACTGTGACTAATGTAGCACCGTGGGTTACAACAGTAGGAGCTGGAACCATGGATAGAGATTTTCCGGCTGATGTTAAGCTGGGAAACGGGAGGGTTGTACTCGGTACTAGTGTCTATGGCGGACCGGCTTTGATTCCGGGTCGTTTGTATCCTCTTATTTATGCAGGAACTGAAGGCGGCGATGGATATTCTTCGTCTCTATGCTTAGAAGGTTCGTTGAACCCCAATTTAGTGAAAGGGAAGATTGTACTTTGTGACAGGGGAATCAATTCAAGAGCTGCTAAAGGTGAGGTTGTGAAAAAGGCTGGAGGATTGGGAATGATTTTAGCAAATGGGGTCTTTGACGGTGAGGGATTGGTAGCTGACTGCCACGTATTACCTGCCACCGCCGTTGGTGCTTCCGGCGGCGACGAGATTCGCAAATATATTGCAGAAGCAGCGAAGTCTCATTCACCGCCAACCGCAACAATTTTGTTCAAGGGAACTCGGCTTGGAGTTAGGCCCGCACCGGTTGTTGCTTCATTTTCAGCTCGAGGTCCAAATCCAGAGTCCCCAGAAATTGTAAAGCCTGATGTGATTGCGCCAGGGTTGAACATTCTTGCCGCTTGGCCTGACAAAATTGGGCCTTCTGGAATTCCCACAGATAAGCGTACCACTGAGTTCAACATACTTTCGGGCACTTCCATGGCCTGTCCTCACGTCTCTGGCTTGGCTGCCCTGCTGAAGGCTGCACACCCAGGATGGAGTCCAGCAGCTATAAAATCAGCCCTGATGACCACAGCTTATACTTTAGACAACCGGGGTGAGACGATGTTAGATGAATCTTCAGGCAATACTTCCACGGTTTTGGACTTTGGAGCTGGCCATGTTCACCCACAAAAGGCAATGGACCCTGGTTTAATCTATGACTTGAATACATATGATTATGTTGATTTCTTGTGTAACGCCAATTACACTACGAAGAATATCCAAGTTATTACTGGGAAGATTGCAGATTGTAGTGGGGCGAAAAGGGCTGGACATACTGGGAATTTGAATTACCCTTCATTGTCTGTGGTGTTTCAACAATATGGTAAGCATAAGATGTCTACACATTTCATAAGAACTGTGACTAACGTTGGAGACGCCAATTCTATCTATAAGGTAACAATAAAGCCACCAAGTGGAATTTCAGTGACAGTTGAACCAGAAAAGCTGGCGTTTAGAAGGGTTGGGCAAAAATTGAGTTTCTTGGTTAGGGTCCAAGCAATGGCTGTTAGACTTTCCCCTGGAAGCTCTAGCATGAAGGGTGGTTCTATAATTTGGACTGATGGAAAGCACGAAGTCACTAGTCCCTTGGTTGTTACCATGCAGCAACCTCTGCAGTAG 2334 47.56 MAVLLRAFFLFSLLIPFSSSSSIDASKKTFIVQVHKDSKPSIFPTHKHWYESSLASISSVNDGGAIIHTYETLFHGFSAKLSPLEVEKLQTLPHIASIIPEQVRHPHTTRSPEFLGLKTSDSAGLLKESDFGSDLVIGVIDTGIWPERQSFNDRDLGPVPSKWKGQCLVAKDFPASSCNRKLIGARFFCSGYEATNGKMNETTEYRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGKAAGMAPKARLAAYKVCWNAGCYDSDILAAFDAAVSDGVDVVSLSVGGVVVPYYLDAIAIGAYRAVAAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTMDRDFPADVKLGNGRVVLGTSVYGGPALIPGRLYPLIYAGTEGGDGYSSSLCLEGSLNPNLVKGKIVLCDRGINSRAAKGEVVKKAGGLGMILANGVFDGEGLVADCHVLPATAVGASGGDEIRKYIAEAAKSHSPPTATILFKGTRLGVRPAPVVASFSARGPNPESPEIVKPDVIAPGLNILAAWPDKIGPSGIPTDKRTTEFNILSGTSMACPHVSGLAALLKAAHPGWSPAAIKSALMTTAYTLDNRGETMLDESSGNTSTVLDFGAGHVHPQKAMDPGLIYDLNTYDYVDFLCNANYTTKNIQVITGKIADCSGAKRAGHTGNLNYPSLSVVFQQYGKHKMSTHFIRTVTNVGDANSIYKVTIKPPSGISVTVEPEKLAFRRVGQKLSFLVRVQAMAVRLSPGSSSMKGGSIIWTDGKHEVTSPLVVTMQQPLQ 777
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34768660 34770993 + MELO3C024314.2.1 Cme01g02767 319743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02767 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 107 IPR037045 -
Cme01g02767 777 CDD Peptidases_S8_3 105 584 IPR034197 -
Cme01g02767 777 Pfam Subtilase family 132 599 IPR000209 GO:0006508|GO:0008236
Cme01g02767 777 Gene3D Peptidase S8/S53 domain 134 631 IPR036852 GO:0004252|GO:0006508
Cme01g02767 777 Pfam PA domain 373 460 IPR003137 -
Cme01g02767 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Cme01g02767 777 SUPERFAMILY Subtilisin-like 107 622 IPR036852 GO:0004252|GO:0006508
Cme01g02767 777 Pfam Fibronectin type-III domain 666 770 IPR041469 -
Cme01g02767 777 Pfam Peptidase inhibitor I9 29 105 IPR010259 -
Cme01g02767 777 Gene3D - 635 773 - -
Cme01g02767 777 Gene3D - 340 487 - -
Cme01g02767 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 7 776 - -
Cme01g02767 777 SUPERFAMILY Protease propeptides/inhibitors 28 105 - -
Cme01g02767 777 CDD PA_subtilisin_like 346 479 - -
Cme01g02767 777 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 7 776 - -
Cme01g02767 777 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Cme01g02767 777 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Cme01g02767 777 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Cme01g02767 777 ProSiteProfiles Serine proteases, subtilase domain profile. 111 618 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02767 Cme-Chr1:34768660 Cme11g00387 Cme-Chr11:3917870 0 dispersed
Cme01g02767 Cme-Chr1:34768660 Cme08g00624 Cme-Chr8:4015273 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02767 - - csv:101210434 1473.37