Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02803 ATGGCGAATTTCCATCTCCCTTCTTCTTCATTTTTCTTCTTCTTCGTTCTTTTTGTCTTCCCTCTAGTTTTCTCTCGATCGCTGGAAACTCAAGAAACATACATCGTTCATGTCTCTAAATCGGAGAAGCCTTCTTTATTCTCCTCTCATCATCACTGGCACTCTTCCATTCTTGAATCACTCTCTCCTTCACCTCATCCGACCAAGCTTCTTTACAACTACGAGCGTGCCGCTAATGGATTCTCCGCACGAATCACGACTGCTCAGGCCGAGGAGCTGCGTCGTGTTCCCGGTATTATTTCGGTGATTCCTGATCGGATCCGTCAGCTTCATACCACTCGGACGCCTCATTTCTTGGGCTTGGCGGATAACCTAGGGCTATGGGCTGACACGAATTATGCTGATGATGTGATTATTGGTGTTCTTGATACTGGAATTTGGCCGGAGAGGCCGAGTTTCTCTGATGAAGGTTTAGCTCCGGTTCCGGCAAGATGGAAAGGTACCTGCGATACTGGGGAGGGATCTTCGGCTTTGGCTTGTAATCGGAAGATTATTGGTGCAAGAGCGTTTTTTTTTGGATATGAGTCTAATTTAAGGGGATCGCTGAAAGGTTCTTCGGATTTCAAATCTGCTAGAGATACGGACGGCCATGGAACTCATACGGCTTCAACGGCTGCAGGTTCGTTCGTTAAGAATGCTAGTTTTTTCCAGTACGCTCGTGGTGAAGCCAGAGGTATGGCGAGTAGAGCTCGTATCGCTGCCTACAAGATCTGCTGGGAATTTGGCTGTTACGACTCTGATATACTTGCCGCTATGGATCAGGCGATTTCCGATGGCGTCGATGTCATCTCTCTCTCAGTCGGATCCTCCGGCCGTGCCCCTGCGTATTATCGAGACTCCATTGCAATCGGGGCGTTTGGTGCAATGCAGCACGGCATCGTTGTTTCTTGCTCCGCCGGTAACTCCGGTCCTGGTCCTTACACGGCTGTGAACATCGCTCCTTGGATCGTCACCGTTGGTGCCTCCACTATCGATAGAGAGTTTCTTGCTGATGTCATTCTTGGAGACAATAGGGTTTTTAGCGGCGTGTCGCTTTACTCCGGTGATCCTCTTGGCGATTCCAAGCTTCCGTTGGTCTATGGTGGAGATTGCGGTAGCAGGTATTGTTATTCTGGATCCCTCGATTCGTCGAAAGTCGCTGGAAGAATTGTCGTGTGCGATCGAGGAGGCAACGCCAGAGTCGCCAAAGGAGGCGCAGTGAAATCCGCCGGCGGTCTTGGTATGGTACTAGCGAACACGGAAGAAAACGGTGAAGAGCTCTTAGCAGACTCCCATCTTATTCCAGGAACAATGGTCGGTGAAATCGCCGGCAACAAGCTTCGAGACTACATTCATACGGATCCGAATCCAACTGCTACAATTGTGTTTCGCGGAACTGTCATCGGCGATTCACCGCCAGCTCCTAAAGTCGCTTCCTTCTCCAGCCGGGGTCCGAACTACAGGACGGCGGAGATTCTAAAACCAGACGTTATAGCTCCGGGAGTTAACATTTTGGCCGGCTGGAGCGGCTACAGCAGTCCGACCGGTCTAAACATCGATCCTCGAAGAGTTGAGTTCAATATCATCTCCGGAACTTCAATGTCTTGCCCTCATGTCAGTGGCGTCGCCGCCTTACTCCGAAAGGCTTTTCCGACGTGGTCACCGGCTGCAATCAAATCTGCTCTGATCACCACTTCTTATTCTTTGGACAGTTCCGGCAGCCCAATCAAAGATCTCGCCACAAGCGAAGAATCAAATCCATTCGTCCATGGCGCCGGCCATATCGATCCCAACCAAGCTCTGAATCCAGGCCTGATTTATGATCTCACTCCTCAAGATTACGTTTCATTTCTCTGCTCAATTGGTTACGATTCTAAACAAATAGCCGTTTTCGTGAAGGGTTCTTCATACTCCCAACTTTGTGAACACAAGCTGAGCAACCCCGGCAACCTGAATTACCCATCATTCTCCGTCGTGTTCGACGACGGCGAGGTGGTGAAATACACGAGAACAGTGACCAATGTAGGAGATGAAACTGAAGTTGTTTATGGAGTGAAAGTAGAAGCTCCACAAGGCGTTGAAATCAGTGTTGTTCCAAACAAGCTGGAGTTCAATAAAGAGAAGACAACACTGTCTTATGAGATCACATTCACCAAAATCAATGGATTCAAGGAATCAGCAAGCTTTGGATCAATTCAATGGAGTGATGGAATCCACAATGTTAGGAGTCCAATCGCCGTGTCCTTTAAGACTGGATCCATAGCTTCGATGTAA 2313 48.94 MANFHLPSSSFFFFFVLFVFPLVFSRSLETQETYIVHVSKSEKPSLFSSHHHWHSSILESLSPSPHPTKLLYNYERAANGFSARITTAQAEELRRVPGIISVIPDRIRQLHTTRTPHFLGLADNLGLWADTNYADDVIIGVLDTGIWPERPSFSDEGLAPVPARWKGTCDTGEGSSALACNRKIIGARAFFFGYESNLRGSLKGSSDFKSARDTDGHGTHTASTAAGSFVKNASFFQYARGEARGMASRARIAAYKICWEFGCYDSDILAAMDQAISDGVDVISLSVGSSGRAPAYYRDSIAIGAFGAMQHGIVVSCSAGNSGPGPYTAVNIAPWIVTVGASTIDREFLADVILGDNRVFSGVSLYSGDPLGDSKLPLVYGGDCGSRYCYSGSLDSSKVAGRIVVCDRGGNARVAKGGAVKSAGGLGMVLANTEENGEELLADSHLIPGTMVGEIAGNKLRDYIHTDPNPTATIVFRGTVIGDSPPAPKVASFSSRGPNYRTAEILKPDVIAPGVNILAGWSGYSSPTGLNIDPRRVEFNIISGTSMSCPHVSGVAALLRKAFPTWSPAAIKSALITTSYSLDSSGSPIKDLATSEESNPFVHGAGHIDPNQALNPGLIYDLTPQDYVSFLCSIGYDSKQIAVFVKGSSYSQLCEHKLSNPGNLNYPSFSVVFDDGEVVKYTRTVTNVGDETEVVYGVKVEAPQGVEISVVPNKLEFNKEKTTLSYEITFTKINGFKESASFGSIQWSDGIHNVRSPIAVSFKTGSIASM 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 35044878 35047443 + MELO3C024346.2.1 Cme01g02803 319779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02803 770 ProSiteProfiles Serine proteases, subtilase domain profile. 109 614 - -
Cme01g02803 770 Pfam Fibronectin type-III domain 663 760 IPR041469 -
Cme01g02803 770 Gene3D Peptidase S8/S53 domain 136 627 IPR036852 GO:0004252|GO:0006508
Cme01g02803 770 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.6 21 764 - -
Cme01g02803 770 Gene3D - 345 481 - -
Cme01g02803 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 764 IPR045051 -
Cme01g02803 770 Pfam PA domain 376 460 IPR003137 -
Cme01g02803 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 111 IPR037045 -
Cme01g02803 770 CDD PA_subtilisin_like 351 474 - -
Cme01g02803 770 SUPERFAMILY Protease propeptides/inhibitors 33 109 - -
Cme01g02803 770 Pfam Subtilase family 135 590 IPR000209 GO:0006508|GO:0008236
Cme01g02803 770 Gene3D - 631 763 - -
Cme01g02803 770 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Cme01g02803 770 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Cme01g02803 770 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Cme01g02803 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Cme01g02803 770 SUPERFAMILY Subtilisin-like 110 618 IPR036852 GO:0004252|GO:0006508
Cme01g02803 770 CDD Peptidases_S8_3 109 580 IPR034197 -
Cme01g02803 770 Pfam Peptidase inhibitor I9 33 111 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02803 Cme-Chr1:35044878 Cme08g00624 Cme-Chr8:4015273 0 dispersed
Cme05g01295 Cme-Chr5:21268432 Cme01g02803 Cme-Chr1:35044878 2.32E-111 transposed
Cme07g01634 Cme-Chr7:22094314 Cme01g02803 Cme-Chr1:35044878 2.72E-154 transposed
Cme08g00050 Cme-Chr8:397288 Cme01g02803 Cme-Chr1:35044878 4.21E-90 transposed
Cme08g00188 Cme-Chr8:1286737 Cme01g02803 Cme-Chr1:35044878 0 transposed
Cme12g00600 Cme-Chr12:10639491 Cme01g02803 Cme-Chr1:35044878 1.30E-149 transposed
Cme01g02803 Cme-Chr1:35044878 Cme02g00307 Cme-Chr2:2555800 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02803 - - csv:101205194 1442.56