Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02806 ATGGGTTTCAAAAAGCTATCATTATTCTCTCCAAAGTATTTGATGCCCAGTTGTTTAAAGCCAAAAAGGCTGCTCAAAGGCTCTTCTTCTTCTTCAAATGGAATTCAAACTTCAAAAAAAATCTCTCTCAGAAGAATCTCATCATTTTCTGATATGAGTGTTAGATCATCTTTATCAGTTATCAGTGATCTTTCGAACTCTTGTATTGGTTCAAATCTTCAAATTTTCACCTTTAATGAACTTAAAGAACTCACTCAATGTTTCACAAAAAGTAATTATTTGGGTGAAGGAGGATTTGGGCCTGTGTTTAAAGGGTTCATTGGTGAGAATTTCAAGCCTGGTTTGAAATCACAGCAAGTGGCTGTCAAGATTTTGGACTTGGATGGCTCTCAAGGCCATAGAGAGTGGCTGGCTGAAGTGTTTTTTCTTGGGCAATTGAGACACCCAAATCTTGTTAATTTGATTGGATATTGTCTTGAAGATGAACAAAGGCTTCTTGTGTATGAATACATGGAAGGAGGAAACTTGGAGAATGTGTTGTTTAAAGGTTGTTATGTTTCGAATTTGACATGGTTACAAAGGATGAAGATTGCATTAGGATCAGCAAAAGGTCTTGCTTTTCTTCATGAAACTGAAAAACCGATCATTTTCCGAGATTTCAAAGCTTCGAACATCTTACTCGACTCGAATTATAATCCAAAACTTTCGGATTTCGGGTTGGCCATAAATGGTCTTGATGAAGATGATATGCACACAGCGACTCGAGTCATGGGAACCGAAGGTTATGCAGCCCCAGAATATGTCATGACAGGGCATTTGTCAACAATGAGTGATGTATTTAGCTTTGGAGTGTTTCTACTAGAGTTGTTAACCGGTCGACGAGCAATTGACAATAGTCGGCCGAGCCGAGAACAAAACTTGGTGACTTGGGGAAGGCATCTCTTGAAAGATAACCACAAACTTGAGAAAATAATTGATCCAAGGCTTGAGGGTGAATACTCAAATGAAGGGTCTAAAAAATTGGCTGCATTAGCTCACCAATGCCTTAGTCACCACCCAAAATGTAGGCCTTCAATGAGCTCAGTGGTGAAGGATTTGGAAGCTATTGTAAAGATGAAAGAGTTTCTAATTGAGCCATTTGTGTATATTGTCCCAAGTGAAGATATCAAAGAGGTGGAGAAATCGACGAACCAGCACCGAGACCAAAAAGGTCGAAGCTATAGGCTTAAGCTACCATCGTTGAGGTCGAGGTCAAGATCCGGTGCCATTCATTCCGATACTACCTTTGTGGAAAATAGATAG 1302 39.48 MGFKKLSLFSPKYLMPSCLKPKRLLKGSSSSSNGIQTSKKISLRRISSFSDMSVRSSLSVISDLSNSCIGSNLQIFTFNELKELTQCFTKSNYLGEGGFGPVFKGFIGENFKPGLKSQQVAVKILDLDGSQGHREWLAEVFFLGQLRHPNLVNLIGYCLEDEQRLLVYEYMEGGNLENVLFKGCYVSNLTWLQRMKIALGSAKGLAFLHETEKPIIFRDFKASNILLDSNYNPKLSDFGLAINGLDEDDMHTATRVMGTEGYAAPEYVMTGHLSTMSDVFSFGVFLLELLTGRRAIDNSRPSREQNLVTWGRHLLKDNHKLEKIIDPRLEGEYSNEGSKKLAALAHQCLSHHPKCRPSMSSVVKDLEAIVKMKEFLIEPFVYIVPSEDIKEVEKSTNQHRDQKGRSYRLKLPSLRSRSRSGAIHSDTTFVENR 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 35070277 35072392 - MELO3C024349.2.1 Cme01g02806 319782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02806 433 PANTHER BNAA02G16030D PROTEIN 40 404 - -
Cme01g02806 433 Gene3D Transferase(Phosphotransferase) domain 1 171 378 - -
Cme01g02806 433 ProSiteProfiles Protein kinase domain profile. 88 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme01g02806 433 CDD STKc_IRAK 94 369 - -
Cme01g02806 433 Pfam Protein tyrosine and serine/threonine kinase 91 366 IPR001245 GO:0004672|GO:0006468
Cme01g02806 433 SUPERFAMILY Protein kinase-like (PK-like) 64 367 IPR011009 -
Cme01g02806 433 PANTHER OS01G0588500 PROTEIN-RELATED 40 404 - -
Cme01g02806 433 Gene3D Phosphorylase Kinase; domain 1 72 170 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02806 Cme-Chr1:35070277 Cme05g02074 Cme-Chr5:28947038 2.49E-153 dispersed
Cme01g02806 Cme-Chr1:35070277 Cme02g00304 Cme-Chr2:2513471 6.28E-31 wgd
Cme01g02806 Cme-Chr1:35070277 Cme07g00169 Cme-Chr7:1107017 6.88E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64641 PF07714 PK_Tyr_Ser-Thr 1.50E-45 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02806 - - csv:101211828 771.155