Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02825 ATGGGAACTATCCCTGCTAGAGCTTTATACATGGGAGCTCTTGAGATTACAAAGAGCTATGTCGGAACTGCCACCATTAGAGTCGGATTTCCAGAAACTAGTGCAGCTACAATTGCTAACGCAGCTGCTGGATTGAGTGCTGCAATGGCAGCTCAGCTTGTATGGACTCCTGTTGATGTTGTGAGTCAAAGACTCATGGTTCAACCTAGATACAACAATCTCAATTCCCCCTCAACTCATTACATCAATGGAATTGATGCGTTTCGAAAGATCCTCAACGCCGATGGCATCCGTGGCCTCTACCGAGGATTTGGGATATCGATTTTGACCTACGCACCGTCGAATGCCATGTGGTGGGCATCTTATTATGTAGCACAGCGGCTGGTTTGGGGTGGAATTGGGTGCTGTTATCATGCAAAGAAGGTTCAGGTTGATGAAGATAATGAAAACGGAGGTTGTAGTAGCAATGTCTACAAACCCGATTCCAAAACTGTGATTGCGGTTCAAGGAGCGAGCGCAGCGATGGCAGGGAGTATATCAGCTTTGATAACAATGCCACTCGATACAATCAAGACGAGATTGCAAGTGTTAGATGGGGATGAAAATGGGAGAAGAGGACCAACTATAGGACAGACATTGAGGAATTTGGTGAGGGAAGGAGGATGGACGGCTTGTTACCGAGGCTTGGCACCACGGTGTGCATCGATGTCGATGTCTGCAACGACAATGATCACTACATATGAGTTTTTGAAACGGCTATCAACAAAGAATCAAGAGAGTTTAACAAGCTAA 792 45.96 MGTIPARALYMGALEITKSYVGTATIRVGFPETSAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQPRYNNLNSPSTHYINGIDAFRKILNADGIRGLYRGFGISILTYAPSNAMWWASYYVAQRLVWGGIGCCYHAKKVQVDEDNENGGCSSNVYKPDSKTVIAVQGASAAMAGSISALITMPLDTIKTRLQVLDGDENGRRGPTIGQTLRNLVREGGWTACYRGLAPRCASMSMSATTMITTYEFLKRLSTKNQESLTS 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 35190687 35192376 - MELO3C024366.2.1 Cme01g02825 319801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02825 263 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 128 IPR018108 -
Cme01g02825 263 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 260 - -
Cme01g02825 263 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 253 IPR018108 -
Cme01g02825 263 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 260 - -
Cme01g02825 263 SUPERFAMILY Mitochondrial carrier 1 250 IPR023395 -
Cme01g02825 263 Pfam Mitochondrial carrier protein 168 257 IPR018108 -
Cme01g02825 263 Pfam Mitochondrial carrier protein 38 129 IPR018108 -
Cme01g02825 263 Gene3D Mitochondrial carrier domain 1 262 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02825 Cme-Chr1:35190687 Cme09g00204 Cme-Chr9:1610689 2.34E-61 dispersed
Cme01g02825 Cme-Chr1:35190687 Cme07g00195 Cme-Chr7:1306859 2.34E-120 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02825 K15121 - csv:101210602 476.863