Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02844 ATGAGTGAAGGGAGAAAGAGGAGAGATCTGATGAAAACTGCAGAAATTTCCTTTGAAATTGGGACTCTGATGGGGTTTCGATTACTGTTTCTGCTGTTTCAAATTTGTTTTGCTGTTAGCTTTTTCTGTGTCTGTGAAGCTGCAGTTGTTCTCCCAGGCAGACTGAGCAGATCACATTCTGTACTTCGAGACCATGCTGTCACTCCAACATCTCATGGCTTTGGCAGGAAACACCATGGCAATTTGGATAATGCTGCCCCTAGAAAACCATTTAAAACTTCATCTCCTCAGATCCATTCCCATTATAAAGCCATTCATCAATCAGATGATTCAAGTTTAACTCCTAGCATTGCACTTCCACCTATCACGCCTGCTAAGAAATGGGGGCACGAACATACATTCTCACCATCGATCTCTTTTCATAAATTCCGCCATTCAAGAAGGAAGTTCAGAAACCATGCTCCACAGCCTACTTATCATGCATTGCCCCCGACTAGCAGCCAGCAAGGTCCTGCTGCTGTCTCTCCAATTCAGTCACCATTACCATCTGCAGCAAGAGGGAGGTATCCCGGACCTACGCCATCACCAACAACTCAACCCAACCATTACTATATGCCCATTCCTGCACCTACAACATCTCCTATGGGTTCTTACAAGAAGAAGAAGAAGAAGAGCATGCCGCCATCACAAGTTATGATGCTACCACCTCCACCTCCTAATGGGGAGCCATTGACATATACACCTCCTGGGACGCCATGTGGCTGTGTGTGGCCGATTCAAGTCAAAATCACTCTTGATGTTGCAGTATACGAATTCTTCCCTTTGGTTTCAAAACTTGCAGATGAAATTGCTGACAGTATCAGTCTGAACCAAAGCCAAGTTCGAATTATGGGAGCTGATGCTGCTAGTCAGCAGTTAGAAAAAACAACCGTCATTATCAACTTGGTTCCAAGAGGATCGAGATTCAATCATAACACAGCTTTTTCTATATACCAGAAATTTTGGGGGAGAAAGATATCCATCAACGCTTCTTTGTTTGGTAGATATCAAGTATTAAATGTCAAATATCCAGCTCTAGCTCATGCAGGTCTTCCACCATCTCCTCCGTTAGCGCCTTCAAGTACTTCATCCATTAATGATGGTTTGAACACTAGCAATACTAATGCTGGAACTGCAATTAAACCATTGGGAGTTGACGTGCCAAGACGGAAAAAAGAAGGGCTTGGCAGGAACATGATCGCTGTGATTACTATTTCATCGTTCACTGCCCTTGTCATGTGTGTTGGGCTTGCTTGGCTTTGCCTCTTGAGATACAGAGTGTCTGCACATCAACCAGCTCAAATTCCACAAAACTTGATAGCCTCACCGACAAAACCATCAGGCACTGCTGGATTGATAATGGTTGGAAGTGAACCTGGTTCTTCATCCACGCGTCTCGATGCCGATCCTATGACGTATATTGGTGCTGCAAAGAACTTCACCTTGAACGATATGGAGAAAGCCACAGACAACTTTGATTCTGCAAGAATATTAGGAGAAGGTGGCTTTGGCATTGTATACAGTGGGAGTTTAGAAGATGGAAGGGATGTAGCTGTGAAGGTTCTTAAAAGACATAATCAACATGGTATTCGGGAATTCTTGGCAGAAGTCGAGATGCTGAGCCGTCTACACCATAGAAATCTAGTTAAGTTGATTGGTATCTGTACAGAGGATCAAATTCGCTGCCTAGTCTACGAATTGGTCCCTAATGGAAGTGTCGAATCACACTTACATGGCTTAAAACTAGATGGTTTGGTATTCATATTCAACTTGCTCTGTGTGGTTCCAGGCATTGACAAGTTAACCAGTCCACTTGATTGGGATGCCCGAATGAAGATTGCCCTCGGTGCTGCTCGAGGCTTAGCCTATCTGCATGAAGACTCCAATCCTCGAGTCATTCATCGAGACTTCAAAGCTAGCAACATCTTGTTGGAATATGACTTTACTCCTAAAGTTTCAGATTTTGGATTAGCTAGAACCGCACTGGAGGAAGGAAACAAGCACATCTCAACACATGTCATGGGAACTTTTGGTTATTTAGCTCCAGAATATGCAATGACTGGCCACCTTCTTGTAAAGAGCGATGTATATAGCTATGGGGTTGTCCTTCTTGAGCTACTAACAGGAAGAAAGCCAGTAGACTTATCGCTTCCACCTGGACAAGAAAATCTCGTTGCTTGGGCTCGTCCACTTCTCACAAGCAAGGAGGGATTGGATGCAATCACCGACCCAGCTATTAAGTCTGATATCTCCATTGATAGCTTGGCCAGAGTAGCAGCAATTGCTTCTATGTGTGTGCAACCGGAAGTATCTCACAGACCATTTATGGGCGAGGTTGTCCAAGCCCTGAAACTCGTTTGCAACGAGTTCGAAGAAACTAATGATCCAGTTTCACGAAGTTACAGCCGAGACGAACTTCTTAGTTACATGGATAGTAAATTTGGAGGAATTTCTGGTGAAATACTAAATGCTCCTGAGTCCTCACGCACCTACCTTTCAGGAAAGGAGACGAATGTAGGATTATCGGCATCGGATTTGATCAGTGCATCTGCAAGATTTGAAGGACAGGAACTGGTTTCTTCTAGATGGCATTCATCAAACTCGGAACCATTGAGAACTGGAAGAAAAAAGCACTTATGGCAGAAGCTAAGAAGTTTGTCAAGAGGCAGCTTCAGTGAACATGGCTTTTCTGCAAAGCTTTGGCCTGGATTCCATTAG 2757 43.96 MSEGRKRRDLMKTAEISFEIGTLMGFRLLFLLFQICFAVSFFCVCEAAVVLPGRLSRSHSVLRDHAVTPTSHGFGRKHHGNLDNAAPRKPFKTSSPQIHSHYKAIHQSDDSSLTPSIALPPITPAKKWGHEHTFSPSISFHKFRHSRRKFRNHAPQPTYHALPPTSSQQGPAAVSPIQSPLPSAARGRYPGPTPSPTTQPNHYYMPIPAPTTSPMGSYKKKKKKSMPPSQVMMLPPPPPNGEPLTYTPPGTPCGCVWPIQVKITLDVAVYEFFPLVSKLADEIADSISLNQSQVRIMGADAASQQLEKTTVIINLVPRGSRFNHNTAFSIYQKFWGRKISINASLFGRYQVLNVKYPALAHAGLPPSPPLAPSSTSSINDGLNTSNTNAGTAIKPLGVDVPRRKKEGLGRNMIAVITISSFTALVMCVGLAWLCLLRYRVSAHQPAQIPQNLIASPTKPSGTAGLIMVGSEPGSSSTRLDADPMTYIGAAKNFTLNDMEKATDNFDSARILGEGGFGIVYSGSLEDGRDVAVKVLKRHNQHGIREFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGLKLDGLVFIFNLLCVVPGIDKLTSPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSLPPGQENLVAWARPLLTSKEGLDAITDPAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFEETNDPVSRSYSRDELLSYMDSKFGGISGEILNAPESSRTYLSGKETNVGLSASDLISASARFEGQELVSSRWHSSNSEPLRTGRKKHLWQKLRSLSRGSFSEHGFSAKLWPGFH 918
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 35340014 35345454 + MELO3C024390.2.1 Cme01g02844 319820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02844 918 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Cme01g02844 918 SUPERFAMILY Protein kinase-like (PK-like) 485 796 IPR011009 -
Cme01g02844 918 PANTHER OS01G0750732 PROTEIN 68 917 - -
Cme01g02844 918 MobiDBLite consensus disorder prediction 154 229 - -
Cme01g02844 918 MobiDBLite consensus disorder prediction 187 203 - -
Cme01g02844 918 Gene3D Phosphorylase Kinase; domain 1 476 580 - -
Cme01g02844 918 CDD STKc_IRAK 511 797 - -
Cme01g02844 918 PANTHER OS01G0750732 PROTEIN 68 917 - -
Cme01g02844 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Cme01g02844 918 MobiDBLite consensus disorder prediction 67 95 - -
Cme01g02844 918 Gene3D Transferase(Phosphotransferase) domain 1 602 818 - -
Cme01g02844 918 ProSiteProfiles Protein kinase domain profile. 505 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme01g02844 918 Pfam Protein tyrosine and serine/threonine kinase 508 796 IPR001245 GO:0004672|GO:0006468
Cme01g02844 918 MobiDBLite consensus disorder prediction 159 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02844 Cme-Chr1:35340014 Cme04g00927 Cme-Chr4:12444515 0 dispersed
Cme06g01335 Cme-Chr6:11283147 Cme01g02844 Cme-Chr1:35340014 2.89E-59 transposed
Cme01g02844 Cme-Chr1:35340014 Cme02g00246 Cme-Chr2:2012503 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64643 PF07714 PK_Tyr_Ser-Thr 5.70E-46 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02844 - - csv:101219484 1637.85