Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g02852 ATGGACAGTTTATGGGATGTTTTGGTAGTGACAGCCATTACTATTATTCTCTATAGGAACTGCTTTAGACTTCTCAGATCAAAATTCTGCAACCAACTTCCTTTGGGCTCTCTTGGCTGGCCTTTCATTGGTGAGACTATTGAGTTCATCTCCTGCGCTTATTCGGACCGTCCCGAGACCTTCATGGACAAGCGTCGTCGCCTGTACGGGAAGGTGTTCAAGTCACATATTTTCGGAAGTCCTACCATTGTCTCTACTGATGCAGAAGTCAGTAAGTTCATTCTGCAGAGTGATGCCAAGGCCTTTGTACCGTCTTATCCGAAATCTTTGACAGAATTGATGGGGAAGTCTTCTATTTTGCTGATAAATGGGAGCTTGCAGAAGAGAATTCATGGTCTTGTGGGAGCTTTCTTCAAGTCTTCACATCTCAAAGCTCAAATAACCAAGGATATGGAGTGTTATGTCAAACTATCGATGGCAAGCTGGACTGAGAACAATCCTATTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTGGTAAAGATATTGATTAGTTTAAATCCTGGTCAAAGTATGGAGTTTCTCAAGAAACAGTTTCAAGAGTTTATAGCTGGGCTTATGGCTTTGCCAGTGAACATACCTGGAAGCAGGCTTTACCAATCCTTGCAGGCCAAAAGGAATATGGTCAAACTAGTAAAGAAGATAATACAAGAGAGGAAAAGCTGTGGAATTTCCACTGTCCCAAAAGATGTCATGGAAGTTTTGCTCAAAGATGAAAATGAAGAACTGACAGATGATCTAATAGCAGAGAACATGATTGATATGATGATTCCCGGAGAAGATTCAGTGCCAATCTTAATGACTCTTGCAGTAAAATACCTCTCTGATTGCCCTGCCGCACTTCAACAGTTGACGGAGGAAAACTTAAAGATGAAAGGACAGAAAGAGCAGCTCGGTGAGGCATTGCATTGGAGCGATTACTTATCGATGCCATTTACGCAGAGTGTGATCACTGAAACTCTAAGGATGGGAAACATTATAATTGGAGTGATGCGTAAGGCCATGAAAGACATGAAGATAAAAGGATACCTAATACTTAAGGGTTGGTCAGTTCTTACATACTTCAGATCTGTTCATCTCGATGACAATCACTATGACTGCCCTTACAAGTTCAATCCATGGAGGTGGCAAGAAAGAGAGTTGAGTAGTTGTAACTTCACTCCTTTTGGAGGTGGACAAAGACTATGCCCTGGACTTGACTTAGCCAGGCTTGAAGCTTCCATCTTCCTTCACCACTTTGTCACTCACTTCAGATGGATTGCCGAAGAAGATAAAATCATAAACTTCCCCACAGTGAGGATGAAAAAGAGGATGCCAGTTTGGGTGAAGAGAAGAAGGGACCCATGA 1416 41.74 MDSLWDVLVVTAITIILYRNCFRLLRSKFCNQLPLGSLGWPFIGETIEFISCAYSDRPETFMDKRRRLYGKVFKSHIFGSPTIVSTDAEVSKFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQKRIHGLVGAFFKSSHLKAQITKDMECYVKLSMASWTENNPIYLQDETKNISFQVLVKILISLNPGQSMEFLKKQFQEFIAGLMALPVNIPGSRLYQSLQAKRNMVKLVKKIIQERKSCGISTVPKDVMEVLLKDENEELTDDLIAENMIDMMIPGEDSVPILMTLAVKYLSDCPAALQQLTEENLKMKGQKEQLGEALHWSDYLSMPFTQSVITETLRMGNIIIGVMRKAMKDMKIKGYLILKGWSVLTYFRSVHLDDNHYDCPYKFNPWRWQERELSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTHFRWIAEEDKIINFPTVRMKKRMPVWVKRRRDP 471
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 35383310 35388605 + MELO3C024396.2.1 Cme01g02852 319828
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme01g02852 471 SUPERFAMILY Cytochrome P450 32 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g02852 471 Pfam Cytochrome P450 34 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g02852 471 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 18 463 - -
Cme01g02852 471 PANTHER CYTOCHROME P450 26 18 463 - -
Cme01g02852 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Cme01g02852 471 Gene3D Cytochrome P450 27 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g02852 471 Coils Coil 304 324 - -
Cme01g02852 471 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g02852 471 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g02852 471 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g02852 471 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g02852 471 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02852 Cme-Chr1:35383310 Cme10g01069 Cme-Chr10:9321685 1.64E-122 dispersed
Cme08g00877 Cme-Chr8:5777745 Cme01g02852 Cme-Chr1:35383310 8.20E-61 dispersed
Cme06g01445 Cme-Chr6:13470519 Cme01g02852 Cme-Chr1:35383310 5.22E-67 transposed
Cme06g02674 Cme-Chr6:33822859 Cme01g02852 Cme-Chr1:35383310 9.75E-90 transposed
Cme07g01717 Cme-Chr7:22681208 Cme01g02852 Cme-Chr1:35383310 2.78E-110 transposed
Cme08g00892 Cme-Chr8:5856568 Cme01g02852 Cme-Chr1:35383310 5.02E-174 transposed
Cme08g01508 Cme-Chr8:14434513 Cme01g02852 Cme-Chr1:35383310 1.72E-97 transposed
Cme09g00202 Cme-Chr9:1562626 Cme01g02852 Cme-Chr1:35383310 7.62E-100 transposed
Cme09g00445 Cme-Chr9:4267410 Cme01g02852 Cme-Chr1:35383310 1.13E-53 transposed
Cme11g02128 Cme-Chr11:28834677 Cme01g02852 Cme-Chr1:35383310 3.22E-73 transposed
Cme11g02383 Cme-Chr11:30763750 Cme01g02852 Cme-Chr1:35383310 5.05E-74 transposed
Cme01g02852 Cme-Chr1:35383310 Cme04g01196 Cme-Chr4:16338502 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g02852 K12638 - csv:101217830 875.93