Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme01g02852 | ATGGACAGTTTATGGGATGTTTTGGTAGTGACAGCCATTACTATTATTCTCTATAGGAACTGCTTTAGACTTCTCAGATCAAAATTCTGCAACCAACTTCCTTTGGGCTCTCTTGGCTGGCCTTTCATTGGTGAGACTATTGAGTTCATCTCCTGCGCTTATTCGGACCGTCCCGAGACCTTCATGGACAAGCGTCGTCGCCTGTACGGGAAGGTGTTCAAGTCACATATTTTCGGAAGTCCTACCATTGTCTCTACTGATGCAGAAGTCAGTAAGTTCATTCTGCAGAGTGATGCCAAGGCCTTTGTACCGTCTTATCCGAAATCTTTGACAGAATTGATGGGGAAGTCTTCTATTTTGCTGATAAATGGGAGCTTGCAGAAGAGAATTCATGGTCTTGTGGGAGCTTTCTTCAAGTCTTCACATCTCAAAGCTCAAATAACCAAGGATATGGAGTGTTATGTCAAACTATCGATGGCAAGCTGGACTGAGAACAATCCTATTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTGGTAAAGATATTGATTAGTTTAAATCCTGGTCAAAGTATGGAGTTTCTCAAGAAACAGTTTCAAGAGTTTATAGCTGGGCTTATGGCTTTGCCAGTGAACATACCTGGAAGCAGGCTTTACCAATCCTTGCAGGCCAAAAGGAATATGGTCAAACTAGTAAAGAAGATAATACAAGAGAGGAAAAGCTGTGGAATTTCCACTGTCCCAAAAGATGTCATGGAAGTTTTGCTCAAAGATGAAAATGAAGAACTGACAGATGATCTAATAGCAGAGAACATGATTGATATGATGATTCCCGGAGAAGATTCAGTGCCAATCTTAATGACTCTTGCAGTAAAATACCTCTCTGATTGCCCTGCCGCACTTCAACAGTTGACGGAGGAAAACTTAAAGATGAAAGGACAGAAAGAGCAGCTCGGTGAGGCATTGCATTGGAGCGATTACTTATCGATGCCATTTACGCAGAGTGTGATCACTGAAACTCTAAGGATGGGAAACATTATAATTGGAGTGATGCGTAAGGCCATGAAAGACATGAAGATAAAAGGATACCTAATACTTAAGGGTTGGTCAGTTCTTACATACTTCAGATCTGTTCATCTCGATGACAATCACTATGACTGCCCTTACAAGTTCAATCCATGGAGGTGGCAAGAAAGAGAGTTGAGTAGTTGTAACTTCACTCCTTTTGGAGGTGGACAAAGACTATGCCCTGGACTTGACTTAGCCAGGCTTGAAGCTTCCATCTTCCTTCACCACTTTGTCACTCACTTCAGATGGATTGCCGAAGAAGATAAAATCATAAACTTCCCCACAGTGAGGATGAAAAAGAGGATGCCAGTTTGGGTGAAGAGAAGAAGGGACCCATGA | 1416 | 41.74 | MDSLWDVLVVTAITIILYRNCFRLLRSKFCNQLPLGSLGWPFIGETIEFISCAYSDRPETFMDKRRRLYGKVFKSHIFGSPTIVSTDAEVSKFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQKRIHGLVGAFFKSSHLKAQITKDMECYVKLSMASWTENNPIYLQDETKNISFQVLVKILISLNPGQSMEFLKKQFQEFIAGLMALPVNIPGSRLYQSLQAKRNMVKLVKKIIQERKSCGISTVPKDVMEVLLKDENEELTDDLIAENMIDMMIPGEDSVPILMTLAVKYLSDCPAALQQLTEENLKMKGQKEQLGEALHWSDYLSMPFTQSVITETLRMGNIIIGVMRKAMKDMKIKGYLILKGWSVLTYFRSVHLDDNHYDCPYKFNPWRWQERELSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTHFRWIAEEDKIINFPTVRMKKRMPVWVKRRRDP | 471 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 35383310 | 35388605 | + | MELO3C024396.2.1 | Cme01g02852 | 319828 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme01g02852 | 471 | SUPERFAMILY | Cytochrome P450 | 32 | 468 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02852 | 471 | Pfam | Cytochrome P450 | 34 | 448 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02852 | 471 | PANTHER | 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 | 18 | 463 | - | - | |
Cme01g02852 | 471 | PANTHER | CYTOCHROME P450 26 | 18 | 463 | - | - | |
Cme01g02852 | 471 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 412 | 421 | IPR017972 | GO:0005506|GO:0016705 | |
Cme01g02852 | 471 | Gene3D | Cytochrome P450 | 27 | 468 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02852 | 471 | Coils | Coil | 304 | 324 | - | - | |
Cme01g02852 | 471 | PRINTS | E-class P450 group I signature | 66 | 85 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02852 | 471 | PRINTS | E-class P450 group I signature | 337 | 355 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02852 | 471 | PRINTS | E-class P450 group I signature | 377 | 401 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02852 | 471 | PRINTS | E-class P450 group I signature | 409 | 419 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g02852 | 471 | PRINTS | E-class P450 group I signature | 419 | 442 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g02852 | Cme-Chr1:35383310 | Cme10g01069 | Cme-Chr10:9321685 | 1.64E-122 | dispersed | |
Cme08g00877 | Cme-Chr8:5777745 | Cme01g02852 | Cme-Chr1:35383310 | 8.20E-61 | dispersed | |
Cme06g01445 | Cme-Chr6:13470519 | Cme01g02852 | Cme-Chr1:35383310 | 5.22E-67 | transposed | |
Cme06g02674 | Cme-Chr6:33822859 | Cme01g02852 | Cme-Chr1:35383310 | 9.75E-90 | transposed | |
Cme07g01717 | Cme-Chr7:22681208 | Cme01g02852 | Cme-Chr1:35383310 | 2.78E-110 | transposed | |
Cme08g00892 | Cme-Chr8:5856568 | Cme01g02852 | Cme-Chr1:35383310 | 5.02E-174 | transposed | |
Cme08g01508 | Cme-Chr8:14434513 | Cme01g02852 | Cme-Chr1:35383310 | 1.72E-97 | transposed | |
Cme09g00202 | Cme-Chr9:1562626 | Cme01g02852 | Cme-Chr1:35383310 | 7.62E-100 | transposed | |
Cme09g00445 | Cme-Chr9:4267410 | Cme01g02852 | Cme-Chr1:35383310 | 1.13E-53 | transposed | |
Cme11g02128 | Cme-Chr11:28834677 | Cme01g02852 | Cme-Chr1:35383310 | 3.22E-73 | transposed | |
Cme11g02383 | Cme-Chr11:30763750 | Cme01g02852 | Cme-Chr1:35383310 | 5.05E-74 | transposed | |
Cme01g02852 | Cme-Chr1:35383310 | Cme04g01196 | Cme-Chr4:16338502 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme01g02852 | K12638 | - | csv:101217830 | 875.93 |