Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00004 ATGTCCAAGCTTCTGCTCCTTCTTTTTCTCATACCACTTGCTCTTACCAAATGGGTTCATGCCTCTCACCTCTATAACCTCTCTGATTCTTCTCTTTTCGATTCTTACCAAACCTCCTTTGCTGCTACCCTTAATCCTCTCATCGTCCCTCTCACTCTCATTCGTGGAGCAGATGCAAAACAAGCGGTCTGTTTGGATGGCACTTTGCCTGGATATCACTTGCATCGTGGATATGGGTCAGGAGCAAATAGCTGGCTTGTTCAATTGGAGGGAGGTGGATGGTGTAACAATATCAGGAATTGTGTCTATCGTAAAACAACCAGGCGTGGATCATCAAGATTTATGGAGAAGCAGATACCATTTACAGGAATTCTAAGTAACAGAGCTGAAGACAATCCTGACTTTTTTAATTGGAACAGAGTAAAGGTTCGTTACTGTGATGGTGCCTCTTTTACTGGGGATTCAGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCTATGGAAGCATTGAAGGCCGAGGGAATGCGGTTTGCTAAACAGGCCTTGCTTTCTGGATGCTCCGCTGGAGGTTTGGCATCTATTTTACACTGTGATGAGTTCAGAGAATTATTTCCAAGAACTACTAAAGTAAAATGTCTGAGTGATGCTGGGTTATTCCTTGATGTGACTGATATATCTGGAGGGCACTATATTAGGAATTTATTTGGAGGTGTGGTAGGCTTGCAGGGAGCAGGAAGAAATTTGCCATCCTTTTGTATGAGCCATCTCGATCCAACTTCGTGTTTCTTCCCACAAAATGTAATTGCTGGAATCAGAACCCCACTGTTTCTTGTCAACGCAGCATACGATTCCTGGCAGATACAATCCAGTTTAGCCCCACCTTCGCTGGATCCAGCTGGTTATTGGCATGATTGTAGGCTGAATCATGCGAAATGTAACCAACCCCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTGAATGCTGTTAGTGATTTCTCAAAATCCTCTGGAAATGGGTTATTTATTAATTCATGTTTTGCTCACTGCCAAACTGAGAGACAGGACACATGGTTTGGTGACAATTCTCCTGTCATTGGAAACAAGCCAATTGCTCTGGCTGTTGGAGATTGGTACTTCGATCGAGCAGCAGTGAAAGCAATTGATTGTCCCTATCCTTGTGACAGGACTTGCCACCATCTGGTTTTTAGAAGCGGTTAG 1245 43.61 MSKLLLLLFLIPLALTKWVHASHLYNLSDSSLFDSYQTSFAATLNPLIVPLTLIRGADAKQAVCLDGTLPGYHLHRGYGSGANSWLVQLEGGGWCNNIRNCVYRKTTRRGSSRFMEKQIPFTGILSNRAEDNPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWLAAMEALKAEGMRFAKQALLSGCSAGGLASILHCDEFRELFPRTTKVKCLSDAGLFLDVTDISGGHYIRNLFGGVVGLQGAGRNLPSFCMSHLDPTSCFFPQNVIAGIRTPLFLVNAAYDSWQIQSSLAPPSLDPAGYWHDCRLNHAKCNQPQIQFLQGFRNQMLNAVSDFSKSSGNGLFINSCFAHCQTERQDTWFGDNSPVIGNKPIALAVGDWYFDRAAVKAIDCPYPCDRTCHHLVFRSG 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 57982 63912 - MELO3C015230.2.1 Cme02g00004 319893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00004 414 PANTHER PECTIN ACETYLESTERASE 2 47 412 - -
Cme02g00004 414 Pfam Pectinacetylesterase 46 391 IPR004963 GO:0016787
Cme02g00004 414 PANTHER NOTUM-RELATED 47 412 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00004 Cme-Chr2:57982 Cme08g02404 Cme-Chr8:30938790 1.56E-150 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00004 K19882 - csv:101218273 847.81