Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00033 ATGGTTTGTGAAGAAGAAACTCTAATCCAAAGGGTTTGTGAATTATATGATGAAATCTCAAGCCTTGAAAGCCTCAAACCTTGTAACAATGTCGACACTCTTTTCACTAAGTTGGTGGTCACGTGCATGTCACCCACCTCCCCTCATTTCCATATCAATTCACTCTCAAAACCACTTCAGCAAATGAGATCAAGTCTCATTAGTCTTTGTGGTCAAGCTGAGTCTCTTTTAGAGTCTCATTTTTCTGATTTGTTGGCCAAATTTGATTCCCCTATCGATCATCTTCATGTCTTCCCTTACTTCTCTAATTACCTTAAACTTAGCCTCCTTGAATTCTCTATTCTCCGCCGCCATGGCCCCCGTGTGCTTCCCTCTGCCGTTGCATTCGTTGGCTCTGGCCCTCTTCCTCTTACCTCCATCGTCCTTGCCACTCGCCACCTCACCTCCACCGTCTTCCACAACTACGATCTCGACCCGGTTGCTAATTCCAAGGCGTCGAATTTGGTGTCGCTTGACCCGGACCTGAAGACGAGGATGGTGTTTCACACATGCGACATCATGAAAGTGACAGAGGAGCTAAAACAGTACGAGGTTGTGTTTTTGGCAGCCCTTGTAGGAATGGAGAAGGACGAAAAATTGAAGGTGATTAAGCATCTGTCAGATTACATGTCAGAAGGAGCTTATTTGATGGTAAGAAGTGCTCATGGAGGAAGAGCTTTTCTATATCCTGTGGTTGAAGATTCTGATTTGTTAGGGTTTGAGGTTCTATCTGTGTTTCATCCCACTGATGAAGTTATCAACTCAGTAATAATTGCAAGAAAAACAACGAAATATGATAACGAAAATGACAGCAACGACAACAACGACGACAACTGTTGTTTGTTTGTTAATTCAGACGAAAATGAGAAGGTGAAGATTAGTAGTGGTATTGATCATAAGAAGGATAATAATGGTGTTGTTCATAATAACAAATGTTCTGAGATTCAAAACGGCTTCAATAATAATCATGGAGGTAAGATTGAGGAATTTGCAATGGAAGCAGCTGAATAA 1050 41.81 MVCEEETLIQRVCELYDEISSLESLKPCNNVDTLFTKLVVTCMSPTSPHFHINSLSKPLQQMRSSLISLCGQAESLLESHFSDLLAKFDSPIDHLHVFPYFSNYLKLSLLEFSILRRHGPRVLPSAVAFVGSGPLPLTSIVLATRHLTSTVFHNYDLDPVANSKASNLVSLDPDLKTRMVFHTCDIMKVTEELKQYEVVFLAALVGMEKDEKLKVIKHLSDYMSEGAYLMVRSAHGGRAFLYPVVEDSDLLGFEVLSVFHPTDEVINSVIIARKTTKYDNENDSNDNNDDNCCLFVNSDENEKVKISSGIDHKKDNNGVVHNNKCSEIQNGFNNNHGGKIEEFAMEAAE 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 324312 326319 - MELO3C015257.2.1 Cme02g00033 319922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00033 349 Gene3D Vaccinia Virus protein VP39 6 276 IPR029063 -
Cme02g00033 349 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 279 IPR004298 GO:0030410|GO:0030418
Cme02g00033 349 Pfam Nicotianamine synthase protein 5 276 IPR004298 GO:0030410|GO:0030418
Cme02g00033 349 PANTHER NICOTIANAMINE SYNTHASE 3 4 300 IPR004298 GO:0030410|GO:0030418
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme02g00033 Cme05g01548 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00033 Cme-Chr2:324312 Cme05g01549 Cme-Chr5:24830592 9.96E-106 dispersed
Cme02g01552 Cme-Chr2:22558673 Cme02g00033 Cme-Chr2:324312 1.07E-101 transposed
Cme02g00033 Cme-Chr2:324312 Cme05g01548 Cme-Chr5:24818750 1.08E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00033 K05953 - csv:101218907 616.69