Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00044 ATGGAATTCCATTGGTTTCAGCCGCTTGTACTTTATGACTCCGCCGTCTTGGGTCGTCGGAATTTGGCCGAAGACGATACAACGAGTACACGAAACAGATTGATGTTCGAAAAGGCGATGAAGCATTTGTTCTTCAAGTTCAATGAACTAACAAAGTCTATAACTTCTAAGAAATGGAGAAACTCTGAAAATGCTTCTGTTGTAAGTGGAAGAGAAGCTGCAGAAGCAATGGCAAAGTCTGCAAAGAAGAAGGATCTGATCATCCATGGTTCCGGGAGTATAAATATTGATGGTTCGAGCAATTTTGTCTCGAGCTTTTCCAAGAGGGGTGAGAAAGGAATCAATCAGGACTGCTGCATTGTGTGGGAGGAATTTGGGTGTCAAAAAGATATGATATTTTGTGGGGTTTTTGATGGCCATGGACCATGGGGCCATTTTGTTGCGAAAAAGGTTAGAGAGTCAATGCCAATTGCTCTACTTTGCAATTGGGAAGAAGCACTTGTTCAAACTTCTCTCCACCAACAGTTGGAACTCAACTCAACAAAAACAAATCTACACTTCAATTTGTGGGAGCGTTCTTATATAGAAGCATGTGCTGTGGTCGATCAAGAACTTGAGCGTCATCGTAAAATCGACACATTTCACAGCGGAACAACAGCCCTTTCCATTGTTCGACAAGGTGATACAATTGTCATTGCAAACCTTGGCGACTCTCGAGCAGTGTTGGCTACAACTTCTAATGATGGAAATTCAATGTTGTCACCTATTCAGCTCACTATCGATTTCAAGCCAAATCTACCTCAAGAGGCTGAGAGGATAACACAATGCAATGGGAGGGTTTTTTGCTTGCAAGATGAACCAGGGACTCAACGTCTTTGGTTGCCGAATGGGAAAACGCCAGGGCTATCAATATCGAGATCGTTTGGCGATTTTTGCGTTAAGCATTTTGGACTTATTTCCATGCCTGATGTAACACAAAGAAGTGTAACCAACAAAGACTTATTTGTTATACTTGCAACTGATGGGATATGGGACGTGGTTTCCAATCAAGAAGCTGTGCAGATCGTACATTCGACGGTAGATAGAAAAAAATCTGCTCAACGATTGGTTGATTATGCAACTTGTGCATGGAAGCAGAAGAGGCCTGGAATTGCAGCAGACGACATGTCAGTTATTGTCCTTTACCTCCATTCTTCACCCTTGCATCAACAATCTTTTGGTATATTGTAG 1230 42.2 MEFHWFQPLVLYDSAVLGRRNLAEDDTTSTRNRLMFEKAMKHLFFKFNELTKSITSKKWRNSENASVVSGREAAEAMAKSAKKKDLIIHGSGSINIDGSSNFVSSFSKRGEKGINQDCCIVWEEFGCQKDMIFCGVFDGHGPWGHFVAKKVRESMPIALLCNWEEALVQTSLHQQLELNSTKTNLHFNLWERSYIEACAVVDQELERHRKIDTFHSGTTALSIVRQGDTIVIANLGDSRAVLATTSNDGNSMLSPIQLTIDFKPNLPQEAERITQCNGRVFCLQDEPGTQRLWLPNGKTPGLSISRSFGDFCVKHFGLISMPDVTQRSVTNKDLFVILATDGIWDVVSNQEAVQIVHSTVDRKKSAQRLVDYATCAWKQKRPGIAADDMSVIVLYLHSSPLHQQSFGIL 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 416182 419861 + MELO3C015268.2.1 Cme02g00044 319933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00044 409 SUPERFAMILY PP2C-like 101 397 IPR036457 -
Cme02g00044 409 SMART PP2C_4 93 394 IPR001932 -
Cme02g00044 409 PANTHER ALPHABET, ISOFORM E-RELATED 40 405 - -
Cme02g00044 409 Pfam Protein phosphatase 2C 124 373 IPR001932 -
Cme02g00044 409 CDD PP2Cc 101 396 IPR001932 -
Cme02g00044 409 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 40 405 - -
Cme02g00044 409 Gene3D - 95 398 IPR036457 -
Cme02g00044 409 ProSiteProfiles PPM-type phosphatase domain profile. 102 396 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00044 Cme-Chr2:416182 Cme11g02045 Cme-Chr11:28213585 7.79E-126 dispersed
Cme06g01826 Cme-Chr6:21448438 Cme02g00044 Cme-Chr2:416182 5.11E-25 transposed
Cme02g00044 Cme-Chr2:416182 Cme05g01581 Cme-Chr5:25027632 1.32E-174 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00044 - - csv:101205485 692.575