Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00048 ATGAGTCAGACAGAAGTATCAAGGATAAAGACCCCTCTCGTTCCGCTCGCTACTTTGATCGGTCGCGAGTTGAGGAACGAGAAGGTTGAGAAACCATTTGTGAAGTATGGACAGGCTGCTTTGGCTAAGAAAGGAGAGGACTACTTTCTGATCAAACCTGACTGCCAGCGTATTCCTGGGAACCCTTCCACTGCATTTTCTGTCTTTGCGATTTTTGATGGACATAATGGCATTTCAGCCGCTATTTTTGCGAAGGAACATTTATTGGAAAATGTCCTAAGTGCAATTCCTCAAGGGGTCAATAGAGAAAAATGGCTTCAGGCTCTTCCCCGAGCACTAGTTGCTGGTTTTGTTAAAACTGACATAGAGTTTCAGCAGAAAGGGGAAACTTCTGGGACTACTGTTACATTTGTTGTGATTGACGGGTGGACTGTTACCGTTGCTTCTGTGGGAGATTCACGGTGCATATTAGACACCCAAGGAGGTGTGGTTTCTCTATTGACAGTTGATCATAGGCTGGAGGAAAATGAGGAAGAGAGGGAACGTGTAACTGCAAGTGGTGGTGAGGTTGGGAGGCTCAATGTTTTTGGCGGGAATGAGGTTGGTCCTCTACGTTGCTGGCCTGGAGGTTTATGCCTTTCTAGGTCCATTGGTGATACGGATGTAGGAGAATATATTGTCCCAATACCACATGTTAAGCAAGTGAAGCTTTCTAATGCTGGTGGAAGGCTAATTATTGCTTCTGATGGTATTTGGGACGCATTATCGTCTGAAATGGCTGCAAAGTCTTGCCGGGGATTACCTGCAGAGCTTGCTGCCAAGCTGGTTGTGAAGGAAGCTTTGCGGTCAAGGGGGTTGAAGGATGATACAACTTGCTTAGTTGTTGATATTATCCCATCTGAGCAACCTATTTTATCACCATCAACTCCAAGGAAGAAGCAAAATGTGCTCACCTCATTCTTTGGGAAGAAATATCCAAGCTCTTTGGGTAAATCTGCTAACAAACTTTCTGCTGTTGGTGTTGTGGAGGAATTGTTTGAAGAAGGTTCTGCTATGCTTGCTGAAAGGCTAGGCAAAGATTTTCCCTCAGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGCCAAGCCGATCAACCCCCAAACGAAAATTTGTCGATGAACTCAGGGCCTTTCTTTTCACCGTCATCGAAGCCATGGGAAGGTCCATTCCTCTGTGCAACTTGTCGAAAAAAGAAAGACGCCATGGAAGGAAAAAGGCCAATAAAACCTACAATAACCGTTTAG 1287 45.07 MSQTEVSRIKTPLVPLATLIGRELRNEKVEKPFVKYGQAALAKKGEDYFLIKPDCQRIPGNPSTAFSVFAIFDGHNGISAAIFAKEHLLENVLSAIPQGVNREKWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSEMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSEQPILSPSTPRKKQNVLTSFFGKKYPSSLGKSANKLSAVGVVEELFEEGSAMLAERLGKDFPSDPNSGIFKCAVCQADQPPNENLSMNSGPFFSPSSKPWEGPFLCATCRKKKDAMEGKRPIKPTITV 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 430735 434628 - MELO3C015271.2.1 Cme02g00048 319937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00048 428 SUPERFAMILY PP2C-like 43 297 IPR036457 -
Cme02g00048 428 SMART PP2C_4 23 295 IPR001932 -
Cme02g00048 428 CDD PP2Cc 43 297 IPR001932 -
Cme02g00048 428 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 427 - -
Cme02g00048 428 ProSiteProfiles PPM-type phosphatase domain profile. 32 297 IPR001932 -
Cme02g00048 428 Gene3D - 37 302 IPR036457 -
Cme02g00048 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Cme02g00048 428 Pfam Protein phosphatase 2C 61 280 IPR001932 -
Cme02g00048 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 427 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00048 Cme-Chr2:430735 Cme10g00238 Cme-Chr10:1567140 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00048 - - csv:101219622 845.499