Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00090 ATGGGTTGTGTTTTGAAGTGTGTTTTCATGATTGTTGTCTTCATTTCAATGCCTTTTTCATTGAAGAAATCTCACATTTTGATTGCTAACTCACTGTTGGATGTAACTGAGAGCTTTAATGTTAACGAGCTAGAGAGAGTTTCAGGGGAAGATGAGAATGGAGGCAATGAGCCTTTCATTTTGGAGAGAGTCAGAGCTCTACTTGGACTTAATCAATTGGGAAATCAAAGCCCATCAGATCTTTCGCCTTCGCCATCTCCGTCGCCCTCGCCATCTCGAGCCACCATTTCTCCTTCTCCTGCTCCAATGGCAGCTCATCGAGTGCACATTCATGAGCATTCTCATCCTCATCAGCTGCGCTTGCATAAGAGCCGACCAAAATACAAACCGAAAAGAAAAGATCCAAGAGAAGGAAGAGTCAGAAAAATTCTTGTTGCAGTTCTTGTGTCTGTAGGAGTCGCCATTTTGTTGTGCTCTATTATTGCCTTTTGGGTCTGCAAGAAGTTCAAAAGTCAGAGAGAGGAATCCATGGAGAAGCTTTCCGTTAAGAGTGAAAGAGAAGATAAGACAGCAAGACCAAAATCTAGCCTTGATCTGTTCGATCTTGGTATGCTAGGTATGGATGTTGAAGAACAGACTCATACTTCTGAAAGTGAGAAGGAGTTATCTGTTCATAAAGAGGGAGAAAGGAGTGAAGAGATGTTGGATTCAGAATTTGATAATGTAAGTGTTTCTTCAACCAAGGAAGTGATGTATGCTCGTGAGGAAGATGATAGTAAATCAATACAATGTGTATCTGATGGAACTCATTCCTCATCTGGGGATAAGGTTACTCCTGTTCAATGTTGTTTATCTGATGACGAGGAATCATTCCATTCTTGTGGTGATTCCAATTTGTCAAATCGTCGCCTTTCAAATGCTTCGGAAACTTCTTCTGCTAATGTGATAACAAATTCTACTTGTTCAGTACCAACTGCGAACTTAGCAAGTAAATTGGAAATACAATGTGATGAATCTAACAAATTATTAACGTCTGACCAGTCTCATCTTGCCCTTTTTCCTTGTAATTCAGAACCCAAAATGCAGATGGTTCCCCATTCTGTTGGCTTCCAAAAGAATGTCGATGTCCCATCTTTATCTCCACCTACTCCACCGCCACCTCCTCCACCGCCACCGCCACCACCGCCTCCTCCTGCAGTCACGGATCGCTGTTCGTTTTCCCTTTCTTCACCCTTTTCAACTGGATCTACTTCTTCTTCTGCATTGTTAAGATCCTCATCTCCGGCATTGTCAGATTATTCTTCCGTATCTCCTATACCATGGAATGATCTGCCATCATCTCAAACCACTACTAAACCTTCATTACCATCATCTGCTATTCCTCCACCCCCTTCTCCACCACCAATTTTGAAAACAAACGCTTACTCTTTCAAAACTCCACCTCCTCCTCCTTCCAAGCTCCCTCAATTCATGTCATTTGGAAAAGAGGCAAATTTAAGGCCAAAACTTAAGCCTCTCCATTGGGACAAAGTAAGAGCTGCACCTGATCAATCAATGGTGTGGGACAAGCTAAGATGGAGTTCATTTGAGCTAGATGAAGAAATGATTGAGTCATTATTTGGTTACAACCAACATGATCCAATGAAGAATGGTGATGCTAGCAACAAAAGTCCTTCTCCAAGCAAGCATATACTAGAGGCAAAGAGACTTCAGAACCTAACCATTCTCTTAAAAGCCTTAAATCTCTCTACAGAACAAGTTTGTGAAGCCATAGAACAAGGGAATGGGCTGCGTTTGAGACAACTTGAAGCACTGGTGAAGATGGTACCAACACAAGAAGAAGAAGCCAAATTGTTAAGCTACGAAGGAGACATTGGTGAATTGGGTTGTACAGAGAAGTTTGTCATAGCAATTCTGAGAATACCATTTGCCTTCCAAAGAGTAGAAGCCATGCTTTACAAAGAAACTTTTGAAGATGAAGTGAATCATCTCAGGAACTCATTTTCCATACTAGAGGAGGCCTGCAAGGAACTAAGATCCAGCAGACTCTTCCTAAAGCTACTAGAAGCCGTCTTAAAAACAGGAAACCGAATGAACGTCGGAACAAGTAGAGGAGGCGCACGAGCATTCAAACTCGACGCGCTCCTAAAACTCTCCGACGTCAAAGGCACGGACGGCAAAACATCCCTACTCCACTTCGTAGTACAAGAAATGATCCGGTCAGAAGGGATCAGAGTATCAGGCAGCATAATGGGGAAAATAAACCAAAAAAACAAACCAAGAACAATGGAAGAACGAGAAAACGATTATCGAAGAATGGGATTAGATTTGGTGTCAGGGTTGAGCACGGAACTGCAGAACGTGAAACGAGCGGCGACGATCGACCTGAAAGTAGTAGGGAGTTCGAGGGGGAATTTGAATGAGGGAATGCGGAAAATGGAGGAATTGGTGGGGAAGGAGTACTTGAGAGGTAATTTTGTGGAAACCATGAAAGGGTTTGTGGGTTATGTGAAGAAGAGGATGGAGGAAGTGAAGAAGGATGAAGAAAGGGTAATGGGGAATGTGAGAGAAATCACGGAGTATTTCCATGGAAATGTGAGCAAAGAAGAGACAAATCCGTTAAGGATTTTTGTGATCGTTAGAGATTTTCTTGGAATGTTGGATAATGTTTGTAAGAGCTTCAAGATTGGTTGTTGA 2697 42.34 MGCVLKCVFMIVVFISMPFSLKKSHILIANSLLDVTESFNVNELERVSGEDENGGNEPFILERVRALLGLNQLGNQSPSDLSPSPSPSPSPSRATISPSPAPMAAHRVHIHEHSHPHQLRLHKSRPKYKPKRKDPREGRVRKILVAVLVSVGVAILLCSIIAFWVCKKFKSQREESMEKLSVKSEREDKTARPKSSLDLFDLGMLGMDVEEQTHTSESEKELSVHKEGERSEEMLDSEFDNVSVSSTKEVMYAREEDDSKSIQCVSDGTHSSSGDKVTPVQCCLSDDEESFHSCGDSNLSNRRLSNASETSSANVITNSTCSVPTANLASKLEIQCDESNKLLTSDQSHLALFPCNSEPKMQMVPHSVGFQKNVDVPSLSPPTPPPPPPPPPPPPPPPAVTDRCSFSLSSPFSTGSTSSSALLRSSSPALSDYSSVSPIPWNDLPSSQTTTKPSLPSSAIPPPPSPPPILKTNAYSFKTPPPPPSKLPQFMSFGKEANLRPKLKPLHWDKVRAAPDQSMVWDKLRWSSFELDEEMIESLFGYNQHDPMKNGDASNKSPSPSKHILEAKRLQNLTILLKALNLSTEQVCEAIEQGNGLRLRQLEALVKMVPTQEEEAKLLSYEGDIGELGCTEKFVIAILRIPFAFQRVEAMLYKETFEDEVNHLRNSFSILEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEMIRSEGIRVSGSIMGKINQKNKPRTMEERENDYRRMGLDLVSGLSTELQNVKRAATIDLKVVGSSRGNLNEGMRKMEELVGKEYLRGNFVETMKGFVGYVKKRMEEVKKDEERVMGNVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDNVCKSFKIGC 898
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 698219 702643 + MELO3C015313.2.1 Cme02g00090 319979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00090 898 Pfam Formin Homology 2 Domain 495 887 IPR015425 -
Cme02g00090 898 Gene3D Formin, FH2 domain 489 895 IPR042201 -
Cme02g00090 898 MobiDBLite consensus disorder prediction 76 136 - -
Cme02g00090 898 PANTHER FORMIN-RELATED 46 388 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cme02g00090 898 PANTHER FORMIN-RELATED 384 895 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cme02g00090 898 MobiDBLite consensus disorder prediction 212 237 - -
Cme02g00090 898 MobiDBLite consensus disorder prediction 372 491 - -
Cme02g00090 898 SMART it6_source 493 896 IPR015425 -
Cme02g00090 898 MobiDBLite consensus disorder prediction 110 130 - -
Cme02g00090 898 PANTHER FORMIN-LIKE PROTEIN 384 895 - -
Cme02g00090 898 PANTHER FORMIN-LIKE PROTEIN 46 388 - -
Cme02g00090 898 SUPERFAMILY Formin homology 2 domain (FH2 domain) 506 892 - -
Cme02g00090 898 MobiDBLite consensus disorder prediction 403 455 - -
Cme02g00090 898 MobiDBLite consensus disorder prediction 378 401 - -
Cme02g00090 898 MobiDBLite consensus disorder prediction 456 470 - -
Cme02g00090 898 ProSiteProfiles Formin homology-2 (FH2) domain profile. 493 898 IPR015425 -
Cme02g00090 898 Coils Coil 654 674 - -
Cme02g00090 898 MobiDBLite consensus disorder prediction 212 240 - -
Cme02g00090 898 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00090 Cme-Chr2:698219 Cme05g00834 Cme-Chr5:10805428 2.63E-137 dispersed
Cme02g00090 Cme-Chr2:698219 Cme12g01971 Cme-Chr12:25543931 1.02E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00090 - - csv:101208374 1528.07