Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00107 ATGGAGAGTCCTAAGATGAATTTTGTTGAGGCCAACATTAAACTAAGATTACGTTTTGAAAGATTCAGTTGCGGAAAAAATGGATGCTTTGATTTGATTTCTCTTGGGAATGGCATGGCATTCTCTATCACCTTCCTCAAATCCTCCGCTCTCTTTCTCACCATTCTCTCCGTTTTCATCTTCTTCATCCTCTTCACTCCCAATCCCTCGCCGGAATCCCCCTCCAGAAGGTCCCTCACCGCCACCGGCGATTCCAATTCCAGTTTCTCTCCGACCCCATCTTGTTCCTCTGTTGAATCTCACTCTGATGGCCTTATTAACTACTTATATTTCCATTTTTGCTTCTTCGATGAAAACCCATCTCTCTCTGTCCCTTTTCTCACTCTCTTTCTTCTCCTCCATTTCTATATCCTCATCAAAACCGCTCAAGATCACTTCTCCATTGTCACTTCCAAGCTCGCCTTTCACCTTAACTTGTCTCCCAGTATGGCGGCTGTGACGCTCTTGGCTTTGGGTAATGGCGCTCCTGATGTATTTGCATCTGTTGCTGCGGTTCGTGGTGGCCAGTATCGAACTGGTTTCGGTGCAATTCTCTCTGCCGGCACATTTGTTTCGGCTTTTGTTGTTGGGTTTGTGGCTATTTATGCTGCTCCGTTCTCGGTGAATCCGGCTCAGTTTGTGAGGGATGTGTTGTTCTATTTGACTGCAGCATTGTTCTTGTTCTATGTGTATCTTAGTGCAGAGATTTTCTTGTGGCAAGCTGTTGGGTTTGTTGGGTTTTATTTGTTCTTTGTTGGATTGGTGTTTTGGATGGATTTGAGAATGGGAAGTGGGAAGGCTAAGAGTGGGGGTGATTTGGGAGTGACTAAAGAAGCTGATGTCTACCATGGTGAGTTGCCTAAAGACTGTGAGATTGGAGAAGGCTACAGAAATGTAGATGAAGGAAAAACCAATTCTGGATTTTGGGAAGCTCTTCGAATAATTATAGAAGGGTGTTTGGGATCAGTGCATCTTGGCGCCTTCTTTATGTTTATTCATAGAATTGTCTATCTTTTGAAGTCCCTTCGGATCCGAAAAGCATGGGAAGCTCCTGTTTCGTTTCTTCTGAAGCTCACCATTCCCCAACCTGCACCTTCCGAATGGAGCAGACTCTATGCATCGGCAAACATTTCTCTCTGTCCTGTTGCGCTTCTATATGCCTGTAACTCATTCATGTCATTTAATCATCCCATTGCTTTCCTCTTACCAAATACGCATTTACCACTTTGGTTCGTAGTACTCCTAGCAAGCTCCTCTCTTGCAATTCTACACTTTGTCATGGAAACTGAGCCCCCAAAAACTGAGCAAGTTCCTATTGTGCTTGCAGCATTTGTCATGAGTGTATTTTGGATTTCGACCATTGCTGGGGAGCTGCTGAACTGTCTTGCAGTTCTTGGAGTGCTTCTTAAACTCCCACCAGCTCTACTTGGTCTTACGGTGCTTGCTTGGGGAAACTCAGTTGGGGATCTTGTGGCTGATGTTGCTCTTGCAAAAGCAGGCCAACCTTTGCTTGCTATGGCTGGATGCTTTGCGGGGCCAATGTTTAACATGCTTGTGGGGCTTGGAACAGCTTTAGTTATACAAACAGCTAACAGTTATCCGGACGCCTACCAGCTTCAATTTCATATCGGAATCGTGATTGCGTTCGTGTTCCTACTTTTCAGCCTGATGGGTTCCCTACTTGTAATTATTTGGTGCAGATTTCGAGTGCCTCGGTTTTGGGGATTCTGCCTTGTACTGCTGTACATTGTCTTCATGGCTGCCAGTTTACTGATGGCCAAGTTGGCATGGTTGTTGGCTTGGAATCATGGAGGGAAGCCCTTTCACTAA 1869 45.21 MESPKMNFVEANIKLRLRFERFSCGKNGCFDLISLGNGMAFSITFLKSSALFLTILSVFIFFILFTPNPSPESPSRRSLTATGDSNSSFSPTPSCSSVESHSDGLINYLYFHFCFFDENPSLSVPFLTLFLLLHFYILIKTAQDHFSIVTSKLAFHLNLSPSMAAVTLLALGNGAPDVFASVAAVRGGQYRTGFGAILSAGTFVSAFVVGFVAIYAAPFSVNPAQFVRDVLFYLTAALFLFYVYLSAEIFLWQAVGFVGFYLFFVGLVFWMDLRMGSGKAKSGGDLGVTKEADVYHGELPKDCEIGEGYRNVDEGKTNSGFWEALRIIIEGCLGSVHLGAFFMFIHRIVYLLKSLRIRKAWEAPVSFLLKLTIPQPAPSEWSRLYASANISLCPVALLYACNSFMSFNHPIAFLLPNTHLPLWFVVLLASSSLAILHFVMETEPPKTEQVPIVLAAFVMSVFWISTIAGELLNCLAVLGVLLKLPPALLGLTVLAWGNSVGDLVADVALAKAGQPLLAMAGCFAGPMFNMLVGLGTALVIQTANSYPDAYQLQFHIGIVIAFVFLLFSLMGSLLVIIWCRFRVPRFWGFCLVLLYIVFMAASLLMAKLAWLLAWNHGGKPFH 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 796853 800518 - MELO3C015334.2.1 Cme02g00107 319996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00107 622 Pfam Sodium/calcium exchanger protein 454 603 IPR004837 GO:0016021|GO:0055085
Cme02g00107 622 Pfam Sodium/calcium exchanger protein 129 269 IPR004837 GO:0016021|GO:0055085
Cme02g00107 622 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 356 607 - -
Cme02g00107 622 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 92 277 - -
Cme02g00107 622 Gene3D - 384 603 IPR044880 -
Cme02g00107 622 Gene3D - 159 285 IPR044880 -
Cme02g00107 622 MobiDBLite consensus disorder prediction 70 95 - -
Cme02g00107 622 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 356 607 - -
Cme02g00107 622 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 92 277 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00107 Cme-Chr2:796853 Cme04g02070 Cme-Chr4:28079990 1.42E-45 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00107 K13754 - csv:101209909 939.873