Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00113 ATGGAAGTTAACAATTCAAGAACACCACCACCACCAAGAACCCACTTCCATAACCACAACAATTCCAAATCCCACCAACATTTCCACACCCACAATGCCATTCTCAGCTCAAATTCCATCCTCATTATCATTGCTTCAATCATTTCCATCACCATTCTCCTTGCCATTTTCCTCCTTATCTTCATGCTCCTTCGTCTCAAATCTGCTCGAAACACTGCCACCGCTACCGCCGCCTCCTCTGCCACCACACAATCCACCACATTCATCATCCCTCACACATCCATCAATTTTGACTCAAGCCCAGAAGTTAAAGGGGGTGGGTGCTTATATGGAGGAAACTCTGGGAGAATTCCTCAGTGTAGAATCAGGGGAGTTCAAGTTTTCACTTATAAGGAGCTGGAATTGGCTACTGATAATTTTAGTGAAGCAAATGTTATTGGAAATGGAAGATTAGGGTTTGTGTATAGAGGAGTTCTTGCAGATGGAGCTGTCGTTGCCATTAAAATGCTTCATAGAGATGGCAAACAGAGGGAACGTTCTTTCAGAATGGAGGTGGATCTCCTAAGCCGCTTGCACTCTCCTTGTTTGGTGGAGTTGCTTGGCTACTGTGCTGACCAACACCATAGGCTTCTGATATTTGAATTTATGCACAATGGCACTCTTCATCATCATCTACATAATCCCAACAGCGAATCTCAGCCATTGGATTGGAATACTAGATTGAGGATAGCCCTTGATTGTGCCAAGGCACTTGAGTTCCTCCATGAGCATGCTGTTCCATCTGTTATTCATAGAAACTTCAAGTGTACCAATGTTCTACTGGATCAGGATTTCCGAGCTAAGGTGTCAGATTTTGGTTCGGCCAAGATGGGCTCTGACAAGATCAATGGTCAGATATCTACACAAGTCCTTGGAACCACAGGATATCTAGCACCAGAGTATGCTTCAACTGGAAAACTCACAACAAAGTCAGATGTGTACAGCTTTGGTATCGTGCTGCTAGAGCTATTGACTGGTCGAGTGCCGGTGGATATCAAGAGACCACAGGGCGAGCATGTTCTTGTCTCATGGGCTCTCCCAAGGCTGACTAATAGAGAAAAACTGGAAAAAATGATCGACCCAGCTATTCAAGGGAAGTACTCAAAAAAGGATCTAATTCAGGTAGCAGCCATTGCAGCCATGTGTGTGCAGCCTGAAGCTGACTACCGGCCTTTGATGACCGATGTCGTGCAGTCACTGGTTCCTTTAGTTAAGAACCCATCGTCATCGTCTCGATTAGAGCATGTCAATATGAACCTATAG 1302 44.85 MEVNNSRTPPPPRTHFHNHNNSKSHQHFHTHNAILSSNSILIIIASIISITILLAIFLLIFMLLRLKSARNTATATAASSATTQSTTFIIPHTSINFDSSPEVKGGGCLYGGNSGRIPQCRIRGVQVFTYKELELATDNFSEANVIGNGRLGFVYRGVLADGAVVAIKMLHRDGKQRERSFRMEVDLLSRLHSPCLVELLGYCADQHHRLLIFEFMHNGTLHHHLHNPNSESQPLDWNTRLRIALDCAKALEFLHEHAVPSVIHRNFKCTNVLLDQDFRAKVSDFGSAKMGSDKINGQISTQVLGTTGYLAPEYASTGKLTTKSDVYSFGIVLLELLTGRVPVDIKRPQGEHVLVSWALPRLTNREKLEKMIDPAIQGKYSKKDLIQVAAIAAMCVQPEADYRPLMTDVVQSLVPLVKNPSSSSRLEHVNMNL 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 849433 852729 + MELO3C015340.2.1 Cme02g00113 320002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00113 433 ProSiteProfiles Protein kinase domain profile. 140 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g00113 433 SUPERFAMILY Protein kinase-like (PK-like) 119 413 IPR011009 -
Cme02g00113 433 Gene3D Transferase(Phosphotransferase) domain 1 216 431 - -
Cme02g00113 433 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 14 425 - -
Cme02g00113 433 MobiDBLite consensus disorder prediction 1 17 - -
Cme02g00113 433 MobiDBLite consensus disorder prediction 1 25 - -
Cme02g00113 433 Gene3D Phosphorylase Kinase; domain 1 113 215 - -
Cme02g00113 433 PANTHER OS01G0750732 PROTEIN 14 425 - -
Cme02g00113 433 CDD STKc_IRAK 146 416 - -
Cme02g00113 433 Pfam Protein tyrosine and serine/threonine kinase 144 413 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02564 Cme-Chr1:33540737 Cme02g00113 Cme-Chr2:849433 7.58E-90 dispersed
Cme02g00113 Cme-Chr2:849433 Cme04g00927 Cme-Chr4:12444515 1.46E-102 dispersed
Cme03g01592 Cme-Chr3:24917943 Cme02g00113 Cme-Chr2:849433 5.01E-73 dispersed
Cme12g00367 Cme-Chr12:5086706 Cme02g00113 Cme-Chr2:849433 5.53E-146 transposed
Cme02g00113 Cme-Chr2:849433 Cme06g00702 Cme-Chr6:4544201 3.20E-101 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64660 PF07714 PK_Tyr_Ser-Thr 7.40E-44 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00113 - - csv:101210578 771.541