Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00137 ATGATGGCTGGAACTAATCAAATCAATCTCAACGAAGCTAGGATGGTGGTTCCACTAAATACCTGGGTTCTCATTTCCAACTTTAAGTTGGCTTACAATCTTCTTCGTCGACCTGATGGGACCTTCAATCGCCATTTGGCAGAGTTTCTCGACCGAAAAGTCCCCGCGAATGCTAACCCTGTTGACGGGGCTTTCTCGTTTGATGTCATTATCGATCGTGCTACGAGTCTGCTTTGTAGAATTTATCGACCGGCCAATGGAGGGGAACCTCAGACTACTAACATTGTTGATCTTGAGAAGCCTGTGGATTCTGAGGTTGTTGTGCCTGTTATTGTTTTCTTTCATGGTGGAAGCTTTGCACATTCGTCTGCTAACAGTGCTATCTATGATACGCTATGTCGTAGATTGGTTAGCCTTTGCAAGGCAGTTGTTGTCTCTGTGAACTACCGGCGTGCGCCTGAGAATCGGTATCCATGTGCTTATGACGATGGATGGGCTGCACTCAATTGGGTAAATTCAAGATCATGGCTCCAAAGTAAAGACTCGAAAACATATATTTATTTGGCTGGTGATAGTTCGGGAGGAAACATTGTACACCATGTTGCATCAAGAGCAGTAAAGTCGGGAATCGAAGTATTGGGTAATATACTTCTAAATCCAATGTTCGGCGGACAGGAAAGAACTGAATCTGAGGTTCGATTGGATGGAAAGTATTTTGTAACCATCCGGGATAGAGATTGGTATTGGAGGGCCTTCCTCCCTGAAGGAGAAGATAGAGATCATCCAGCATGTAATCCCTTCGGTCCCAGGGGCAATAGCCTCAAAGGAATCAAGTTCCCGAAAAGCCTTGTCGTGGTGGCTGGTTTAGACCTTGTCCAAGATTGGCAATTGGCTTACGCCAGAGGGCTGGAGAATGATGGCCAAGAGGTGAAACTTTTGTATCTTGAGCAGGCAACAATTGGCTTCTACTTGCTACCGAATACTGAGCACTTCTATACCGTCATGGACGAGATAAGTGAATTCGTGAGTTCTGACAGTTAA 1041 45.24 MMAGTNQINLNEARMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGAFSFDVIIDRATSLLCRIYRPANGGEPQTTNIVDLEKPVDSEVVVPVIVFFHGGSFAHSSANSAIYDTLCRRLVSLCKAVVVSVNYRRAPENRYPCAYDDGWAALNWVNSRSWLQSKDSKTYIYLAGDSSGGNIVHHVASRAVKSGIEVLGNILLNPMFGGQERTESEVRLDGKYFVTIRDRDWYWRAFLPEGEDRDHPACNPFGPRGNSLKGIKFPKSLVVVAGLDLVQDWQLAYARGLENDGQEVKLLYLEQATIGFYLLPNTEHFYTVMDEISEFVSSDS 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1047860 1050040 - MELO3C015362.2.1 Cme02g00137 320026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00137 346 Pfam alpha/beta hydrolase fold 111 323 IPR013094 GO:0016787
Cme02g00137 346 PANTHER GIBBERELLIN RECEPTOR GID1C 4 342 - -
Cme02g00137 346 Gene3D alpha/beta hydrolase 1 344 IPR029058 -
Cme02g00137 346 PANTHER ARYLACETAMIDE DEACETYLASE 4 342 - -
Cme02g00137 346 SUPERFAMILY alpha/beta-Hydrolases 59 342 IPR029058 -
Cme02g00137 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 111 127 IPR002168 GO:0016787
Cme02g00137 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 186 198 IPR033140 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02149 Cme-Chr1:30364004 Cme02g00137 Cme-Chr2:1047860 0 dispersed
Cme02g00137 Cme-Chr2:1047860 Cme09g00114 Cme-Chr9:860050 3.76E-81 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00137 K14493 - csv:101213253 655.595