Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme02g00152 | ATGACTCCCATTTTGAGTTATGTTGTGTCTAAATGGCAAGCGTTGTCCACTTCTGATCATGCTTCTGTTGTTTCCATTAACTTGTTTGTGGCACTTCTCTGTGCTTGTATTGTCATTGGTCATCTTCTTGAGGAGACCCGGTGGATGAATGAGTCCATCACTGCACTCTTCATTGGTTTGTTTACTGGAGTTATCATTCTACTAGTTAGTGGTGGGAAAAGTTCGCATCTATTGCTCTTTAGTGAAGATACGTTCTTCATTTATCTTCTGCCACCTATTATATTCAACGCCGGGTTTCAGGTGAAAAAGAAGCAGTTCTTCGTTAACTTTATGACCATTATGATGTTTGGCGCAATTGGTACATTAGTCTCTTGTTTAATCATCTCGTTAGGAGCTTTTCAGTTCTTTAAGAAAATGGATGTTGGATCTCTAGATATTGCTGATATTTTAGCAATTGGAGCTATATTTGCCGCAACAGATTCTGTATGCACGTTGCAGATATTAAACCAGGATGAAACCCCTCTACTTTACAGTCTAGTATTTGGGGAGGGTGTAGTGAATGACGCCACATCTGTGGTGCTTTTCAATGCAATTCAGAGCTTAGATCTCAGTAAAGTTGATGCAACAGTTGCTTTAAATTTTATTGGGAGCTTCTTTTATTTATTTTCAACAAGCACTTTACTCGGAGTATTTGTGAGTCCTCTCCCTCTTCATCAATCTCTCTCTACCGTTTTGTGTGGATGCAAGCACTCGACAGATCGTGAGGTCGCTCTTATGATACTCATGGCATATCTTTCTTATATGCTGGCTGAATTATTAGATTTGAGTGGCATTCTCACGGTGTTCTTTTGTGGAATTGTAATGTCACATTATACCTGGCATAATGTGACTGAGAGCTCAAGAGTTACCACCAAGCATGCTTTTGCCACATTATCCTTCATTTCTGAGACATTTATCTTCGTCTATGTCGGCATGGATGCATTGGACATTGAAAAGTGGAGCTTTGTTAGTGATAGTCCGGGGACATCAGTTGCTGTGAGCGCAATATTACTAGGCCTTGTTATGGTTGGAAGAGCTGCTTTTGTTTTTCCATTGTCATTTATATCAAACTTAGCTAAAAAATCATCTGGCGAGAAAATTACCTTCCGGGAACAAGTTATCATTTGGTGGGCTGGTCTCATGAGAGGGGCTGTCTCTATTGCTTTAGCTTATCATCAGTTCACTAGAGCTGGGCACACTCAACTTCGAGGGAATGCAATGATGATCACCAGTACCATCACTGTTGTCCTCTTCAGCACGATGGTGTTTGGATTATTGACCAAGCCTCTTATTAACTGTTTGATACCTCAACCAAAACACACCACCAGCATGCTATCGGACCCTGGGACTCCAAAGTCATTCTCGGTTCCACTACTCGGAAGTGCACAGGATTCAGAGCTGGATCTTGACAGTCCCCATGTTCCTCGTCCAAGCAGTATACGTGCACTCCTTGCGACTCCTACACACACCGTTCATCGCTACTGGCGAAAGTTCGACGATGCTTTCATGCGTCCAATGTTTGGGGATCACCAACCGAGAGGGGTCGGCACTGAGAACAAACCCCCCCGCTTAGGATGCTTCAAACAATGTAAGATATGTAAATCAAGATGGATAAATTACTTAGTCATGTCAAGTTTTCGAGCAGCGGACAAGGGCAGGCGTTGTGTATCGCATGTTTGCCAGGAATGGCGTGGAGCAGAGCTGTCGGAATTTGTTGATTCTCTCTTGCCTGTTTGCTGCCCTCTTATTTTTGGTACAAATCGTTATGGTTTG | 1812 | 42.6 | MTPILSYVVSKWQALSTSDHASVVSINLFVALLCACIVIGHLLEETRWMNESITALFIGLFTGVIILLVSGGKSSHLLLFSEDTFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMMFGAIGTLVSCLIISLGAFQFFKKMDVGSLDIADILAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSLDLSKVDATVALNFIGSFFYLFSTSTLLGVFVSPLPLHQSLSTVLCGCKHSTDREVALMILMAYLSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFISETFIFVYVGMDALDIEKWSFVSDSPGTSVAVSAILLGLVMVGRAAFVFPLSFISNLAKKSSGEKITFREQVIIWWAGLMRGAVSIALAYHQFTRAGHTQLRGNAMMITSTITVVLFSTMVFGLLTKPLINCLIPQPKHTTSMLSDPGTPKSFSVPLLGSAQDSELDLDSPHVPRPSSIRALLATPTHTVHRYWRKFDDAFMRPMFGDHQPRGVGTENKPPRLGCFKQCKICKSRWINYLVMSSFRAADKGRRCVSHVCQEWRGAELSEFVDSLLPVCCPLIFGTNRYGL | 604 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1124312 | 1130140 | - | MELO3C015375.2.1 | Cme02g00152 | 320041 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme02g00152 | 604 | PANTHER | SODIUM/HYDROGEN EXCHANGER 2 | 7 | 522 | - | - | |
Cme02g00152 | 604 | PRINTS | Na+/H+ exchanger signature | 98 | 112 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cme02g00152 | 604 | PRINTS | Na+/H+ exchanger signature | 153 | 163 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cme02g00152 | 604 | PRINTS | Na+/H+ exchanger signature | 84 | 95 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cme02g00152 | 604 | PRINTS | Na+/H+ exchanger signature | 113 | 121 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cme02g00152 | 604 | Pfam | Sodium/hydrogen exchanger family | 29 | 445 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Cme02g00152 | 604 | Gene3D | - | 145 | 197 | - | - | |
Cme02g00152 | 604 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 7 | 522 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme02g00152 | Cme-Chr2:1124312 | Cme11g01975 | Cme-Chr11:27727998 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme02g00152 | - | - | csv:101214934 | 929.472 |