Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00152 ATGACTCCCATTTTGAGTTATGTTGTGTCTAAATGGCAAGCGTTGTCCACTTCTGATCATGCTTCTGTTGTTTCCATTAACTTGTTTGTGGCACTTCTCTGTGCTTGTATTGTCATTGGTCATCTTCTTGAGGAGACCCGGTGGATGAATGAGTCCATCACTGCACTCTTCATTGGTTTGTTTACTGGAGTTATCATTCTACTAGTTAGTGGTGGGAAAAGTTCGCATCTATTGCTCTTTAGTGAAGATACGTTCTTCATTTATCTTCTGCCACCTATTATATTCAACGCCGGGTTTCAGGTGAAAAAGAAGCAGTTCTTCGTTAACTTTATGACCATTATGATGTTTGGCGCAATTGGTACATTAGTCTCTTGTTTAATCATCTCGTTAGGAGCTTTTCAGTTCTTTAAGAAAATGGATGTTGGATCTCTAGATATTGCTGATATTTTAGCAATTGGAGCTATATTTGCCGCAACAGATTCTGTATGCACGTTGCAGATATTAAACCAGGATGAAACCCCTCTACTTTACAGTCTAGTATTTGGGGAGGGTGTAGTGAATGACGCCACATCTGTGGTGCTTTTCAATGCAATTCAGAGCTTAGATCTCAGTAAAGTTGATGCAACAGTTGCTTTAAATTTTATTGGGAGCTTCTTTTATTTATTTTCAACAAGCACTTTACTCGGAGTATTTGTGAGTCCTCTCCCTCTTCATCAATCTCTCTCTACCGTTTTGTGTGGATGCAAGCACTCGACAGATCGTGAGGTCGCTCTTATGATACTCATGGCATATCTTTCTTATATGCTGGCTGAATTATTAGATTTGAGTGGCATTCTCACGGTGTTCTTTTGTGGAATTGTAATGTCACATTATACCTGGCATAATGTGACTGAGAGCTCAAGAGTTACCACCAAGCATGCTTTTGCCACATTATCCTTCATTTCTGAGACATTTATCTTCGTCTATGTCGGCATGGATGCATTGGACATTGAAAAGTGGAGCTTTGTTAGTGATAGTCCGGGGACATCAGTTGCTGTGAGCGCAATATTACTAGGCCTTGTTATGGTTGGAAGAGCTGCTTTTGTTTTTCCATTGTCATTTATATCAAACTTAGCTAAAAAATCATCTGGCGAGAAAATTACCTTCCGGGAACAAGTTATCATTTGGTGGGCTGGTCTCATGAGAGGGGCTGTCTCTATTGCTTTAGCTTATCATCAGTTCACTAGAGCTGGGCACACTCAACTTCGAGGGAATGCAATGATGATCACCAGTACCATCACTGTTGTCCTCTTCAGCACGATGGTGTTTGGATTATTGACCAAGCCTCTTATTAACTGTTTGATACCTCAACCAAAACACACCACCAGCATGCTATCGGACCCTGGGACTCCAAAGTCATTCTCGGTTCCACTACTCGGAAGTGCACAGGATTCAGAGCTGGATCTTGACAGTCCCCATGTTCCTCGTCCAAGCAGTATACGTGCACTCCTTGCGACTCCTACACACACCGTTCATCGCTACTGGCGAAAGTTCGACGATGCTTTCATGCGTCCAATGTTTGGGGATCACCAACCGAGAGGGGTCGGCACTGAGAACAAACCCCCCCGCTTAGGATGCTTCAAACAATGTAAGATATGTAAATCAAGATGGATAAATTACTTAGTCATGTCAAGTTTTCGAGCAGCGGACAAGGGCAGGCGTTGTGTATCGCATGTTTGCCAGGAATGGCGTGGAGCAGAGCTGTCGGAATTTGTTGATTCTCTCTTGCCTGTTTGCTGCCCTCTTATTTTTGGTACAAATCGTTATGGTTTG 1812 42.6 MTPILSYVVSKWQALSTSDHASVVSINLFVALLCACIVIGHLLEETRWMNESITALFIGLFTGVIILLVSGGKSSHLLLFSEDTFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMMFGAIGTLVSCLIISLGAFQFFKKMDVGSLDIADILAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSLDLSKVDATVALNFIGSFFYLFSTSTLLGVFVSPLPLHQSLSTVLCGCKHSTDREVALMILMAYLSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFISETFIFVYVGMDALDIEKWSFVSDSPGTSVAVSAILLGLVMVGRAAFVFPLSFISNLAKKSSGEKITFREQVIIWWAGLMRGAVSIALAYHQFTRAGHTQLRGNAMMITSTITVVLFSTMVFGLLTKPLINCLIPQPKHTTSMLSDPGTPKSFSVPLLGSAQDSELDLDSPHVPRPSSIRALLATPTHTVHRYWRKFDDAFMRPMFGDHQPRGVGTENKPPRLGCFKQCKICKSRWINYLVMSSFRAADKGRRCVSHVCQEWRGAELSEFVDSLLPVCCPLIFGTNRYGL 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1124312 1130140 - MELO3C015375.2.1 Cme02g00152 320041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00152 604 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 522 - -
Cme02g00152 604 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cme02g00152 604 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cme02g00152 604 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cme02g00152 604 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cme02g00152 604 Pfam Sodium/hydrogen exchanger family 29 445 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cme02g00152 604 Gene3D - 145 197 - -
Cme02g00152 604 PANTHER SODIUM/HYDROGEN EXCHANGER 7 522 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00152 Cme-Chr2:1124312 Cme11g01975 Cme-Chr11:27727998 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00152 - - csv:101214934 929.472