Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00153 ATGGGGTGTTTGGTGAGCCGAGAGGCGTCTTCTAGAAGTGTAGAAGCCCCTGTAGATAAGGGGAAGAGGAATCAAATTACTGAGTCTCGTGTCCAAGGTGAGATTGTTCAGGAGAAAGAAGTAGAACGTGTGAGTGCTAATGTAGAGGAGCATGTAAACGTGAACAAGGAAGAGGAACAGAAGGCTGATGTGGTTCAGGATCGCCCACGAGCTGAACGGAGAAAGTCGAGGAAGGTTCCGAGGCCATCTAACTTGCCAAACCATTCCCAGGGAGAGCAAGTTGCTGCTGGATGGCCTTCCTGGCTCACAGCTGTTTGTGGAGAGGCTCTCAATGGTTGGATTCCTCGGAAGGCTGATACATTTGAAAAGATTGATAAGATTGGACAAGGAACGTATAGCAATGTGTATAAAGCTAAAGATATACTTACAGGTAAAATTGTTGCACTGAAGAAGGTTCGATTTGACAATCTGGAACCTGAAAGTGTGAAATTTATGGCTAGAGAGATTCTCATCCTTAGGAGATTAAATCATAACAATGTTGTGAAATTGGAAGGGTTGGTTACATCACGGATGTCATGTAGTTTATACTTGGTGTTTGAGTACATGGAACATGATTTAGCAGGTCTTGCTGCAAATCCATCGATCAAATTTACAGAATCTCAGGTTAAATGTTTCATGCAACAACTGCTATCTGGATTGGAGCACTGTCATAATCGCCGGGTGCTTCACCGTGACATTAAAGGATCTAATCTTCTCATTGATAGTGGAGGAGTGCTTAAGATTGCTGACTTTGGATTGGCTTCATTCTTTGATCCAAATCACAAGCATCCTATGACTAGTCGGGTGGTTACCTTATGGTATCGACCTCCTGAACTTCTTCTTGGAGCAACTGATTATGGAGTAGGTGTAGACCTCTGGAGTGCTGGGTGTATATTGGCAGAGTTATTAGCTGGGAGGCCTATTATGCCCGGTCGTACAGAGGTAGAGCAACTACACAAGATATACAAGCTTTGTGGCTCCCCTTCAGATGAATATTGGAAAAGAGCAAAACTTCCAAATGCAACCTTATTTAAGCCCGGAGAACCTTATAAAAGATGTATAAAGGAGACATTTAAAGATTTTCCCCCGTCTTCTCTGCCCCTTATAGAAACGCTTCTTGCAATTGATCCAGCAGAACGAAAGACAGCAACAGATGCATTAAATAGCGAGTTCTTCATGACAGAACCTTTAGCCTGCAAACCCTCCAACCTCCCAAAATATCCTCCCAGTAAGGAGATGGATGCTAGAAGACGGGATGACGAAGCTCGGAGATTAAGAGCAGCTAGTAAAGCTCAAGGAGATGGAGCTAAGAAAACACGCACACGTGTTAGGGCTATTCCAGCTCCCGAAGCCAATGCCGAAATACAAACAAATATTGATAGAAGGCGCTTAATTACACATGCTAATGCAAAGAGCAAAAGTGAAAAGTTCCCCCCACCGCACCAAGATGGAGCACTTGGCTTTACGCTAGGATATTCACGTCATATCGACCCAGCTGGTGTTCCTCCCGACATACCTTTTAGCTCGACGTTATTCACTTATTCTAAGGAACCAATCCAAGCCTGGTCTGGTCCACTAGTCCCCGGTGCTGGCACTGATGGTCCTCATAGACAGAAGAAGCATGCAGGAGGTAAAGGCAAGAAAATCATGGTCTAA 1695 44.37 MGCLVSREASSRSVEAPVDKGKRNQITESRVQGEIVQEKEVERVSANVEEHVNVNKEEEQKADVVQDRPRAERRKSRKVPRPSNLPNHSQGEQVAAGWPSWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDILTGKIVALKKVRFDNLEPESVKFMAREILILRRLNHNNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPSIKFTESQVKCFMQQLLSGLEHCHNRRVLHRDIKGSNLLIDSGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIYKLCGSPSDEYWKRAKLPNATLFKPGEPYKRCIKETFKDFPPSSLPLIETLLAIDPAERKTATDALNSEFFMTEPLACKPSNLPKYPPSKEMDARRRDDEARRLRAASKAQGDGAKKTRTRVRAIPAPEANAEIQTNIDRRRLITHANAKSKSEKFPPPHQDGALGFTLGYSRHIDPAGVPPDIPFSSTLFTYSKEPIQAWSGPLVPGAGTDGPHRQKKHAGGKGKKIMV 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1140221 1149290 - MELO3C015376.2.1 Cme02g00153 320042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00153 564 PANTHER OS01G0367700 PROTEIN 49 553 - -
Cme02g00153 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Cme02g00153 564 Gene3D Transferase(Phosphotransferase) domain 1 204 444 - -
Cme02g00153 564 Pfam Protein kinase domain 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g00153 564 MobiDBLite consensus disorder prediction 423 454 - -
Cme02g00153 564 SMART serkin_6 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g00153 564 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Cme02g00153 564 CDD STKc_CDK9_like 121 405 - -
Cme02g00153 564 MobiDBLite consensus disorder prediction 1 93 - -
Cme02g00153 564 MobiDBLite consensus disorder prediction 13 73 - -
Cme02g00153 564 MobiDBLite consensus disorder prediction 415 454 - -
Cme02g00153 564 ProSiteProfiles Protein kinase domain profile. 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g00153 564 MobiDBLite consensus disorder prediction 542 564 - -
Cme02g00153 564 PANTHER CELL DIVISION PROTEIN KINASE 49 553 - -
Cme02g00153 564 Gene3D Phosphorylase Kinase; domain 1 108 203 - -
Cme02g00153 564 Coils Coil 41 68 - -
Cme02g00153 564 SUPERFAMILY Protein kinase-like (PK-like) 115 409 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme02g00153 Cme05g01749 CCT
Cme02g00153 Cme05g01749 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00153 Cme-Chr2:1140221 Cme12g01566 Cme-Chr12:23051938 0 dispersed
Cme03g00895 Cme-Chr3:17052593 Cme02g00153 Cme-Chr2:1140221 9.46E-154 transposed
Cme04g01874 Cme-Chr4:26453632 Cme02g00153 Cme-Chr2:1140221 6.25E-116 transposed
Cme05g00041 Cme-Chr5:296340 Cme02g00153 Cme-Chr2:1140221 7.19E-117 transposed
Cme06g00688 Cme-Chr6:4487424 Cme02g00153 Cme-Chr2:1140221 0 transposed
Cme08g00466 Cme-Chr8:2847993 Cme02g00153 Cme-Chr2:1140221 1.50E-138 transposed
Cme02g00153 Cme-Chr2:1140221 Cme05g01749 Cme-Chr5:26533664 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64662 PF00069 Pkinase 4.90E-68 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00153 K08819 - csv:101215893 1122.07