Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00165 ATGGACTTCAGAAATTCGATGATTTGGTTTGTGTTTATGGTGTGTTTATTGAGATGTGGATGGAGATTTTTGAACTGGATTTGGTTAACGCCAAAGAAACTCGAGAAGTGCTTGAGAGAACAAGGATTCGCTGGAAATCCTTACCGTCTTTACTCCGGCGACTTGAACGACGTAGTCGCCATGGAAGAAGAAGCTAAATCCAAACCCATGAACTTCTCGCATGATATTGTTCCACGTGTCATCCCATCCATGCATCATACCATTAAAAAATATGGGAAGAATTCATTCATGTGGCTTGGACCAAATCCAAGAGTGTTGATCATGGACCCTGAGCAATTGAAAGCTGCTCTTTCTCTGTACAATGACTTTCAAAAGCCAACCACTAACCCTCTTGTTAGGTTGCTTTTTGATGGACTTATTAATCATGAAGGAGAAAAATGGGTTAAACATAGAAAAATAATCAACCATGCCTTTCATTTTGAGAAGTTGAAGGACATGGTGCCAACAATGTTTGAGAGTTGCAATGAGATGATTAGCAAATGGGAAAAAATGACATCAAAAGATGGATCTTGTGAATTGGATGTGGTGCCTTATTTACAAAGCTTGACGGCCGATGTCATTTCTCGAACAGCATTTGGAAGTACTTACGAAGAAGGAAAAATTATTTTTAATCATTTCAAAGAATTGATTCGTTTGGTCCTTCAAGCTAGTAATACCGTTTACTTACCCGGATGGAGGTTTCTACCAACAAAGTCCAACAATAGAATGAAAAAGATAACTAAAGAAATAAAAACTATACTCATGAATATTATTGATAAAAGGCAAAGAACAATGAAGGAAGATGAAACGATGCATAGTGATGATCTATTGGGCATTCTCTTAGAATCAAATTCCAATGAAATAAAAGAACATGGAAATGTGAACATTGGAATGAGCATAAATGATTTGATTGAAGAATGTAAGATTTTTTATTTTGCTGGCCAAGAAACCACTGCAGTGCTATTAGTTTGGACCATGGTTTTGTTGGGTTCATATACAAAATGGCAAGATAGAGCGAGAGCTGAAGTCCTACAGGTAACTATGATTTTGAACGAGGTTTTGAGATTATACCCACCAGGAAGTGCTGTTAGTCGTAATCTTGTTAAAAAAGAAACAAGGCTTGGAAATTTGAAATTTTCAAGTGGAGTGACGTTGAGTTTCCCTATTATTCTTATCCATCGAGATAAAGAGCTTTGGGGTGAAGATGCAGATGAATTTAATCCAGAAAGATTTGCTGAGGGAGTTTCAAAAGCAACCAAAAACCAAACCGCATTCTTCCCCTTCGGTTGGGGTCCTCGAATATGTGTTGGACAAAATTTTGCTATGATTGAAGCCAAAATTGCATTGTCCATCATTTTACAACACTTCTCATTTGAGCTTTCTCCATCCTATACTCATGCTCCTATATCCATTTTAACTATTCAACCTCAGCATGGAGCTCATATCATCCTACATAAGCTTTAG 1503 37.26 MDFRNSMIWFVFMVCLLRCGWRFLNWIWLTPKKLEKCLREQGFAGNPYRLYSGDLNDVVAMEEEAKSKPMNFSHDIVPRVIPSMHHTIKKYGKNSFMWLGPNPRVLIMDPEQLKAALSLYNDFQKPTTNPLVRLLFDGLINHEGEKWVKHRKIINHAFHFEKLKDMVPTMFESCNEMISKWEKMTSKDGSCELDVVPYLQSLTADVISRTAFGSTYEEGKIIFNHFKELIRLVLQASNTVYLPGWRFLPTKSNNRMKKITKEIKTILMNIIDKRQRTMKEDETMHSDDLLGILLESNSNEIKEHGNVNIGMSINDLIEECKIFYFAGQETTAVLLVWTMVLLGSYTKWQDRARAEVLQVTMILNEVLRLYPPGSAVSRNLVKKETRLGNLKFSSGVTLSFPIILIHRDKELWGEDADEFNPERFAEGVSKATKNQTAFFPFGWGPRICVGQNFAMIEAKIALSIILQHFSFELSPSYTHAPISILTIQPQHGAHIILHKL 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1232509 1237286 + MELO3C015388.2.1 Cme02g00165 320054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00165 500 Pfam Cytochrome P450 84 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00165 500 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 497 - -
Cme02g00165 500 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00165 500 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00165 500 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00165 500 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00165 500 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00165 500 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00165 500 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00165 500 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00165 500 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00165 500 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00165 500 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00165 500 SUPERFAMILY Cytochrome P450 77 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00165 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Cme02g00165 500 Gene3D Cytochrome P450 33 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme02g00165 500 PANTHER CYTOCHROME P450 PROTEIN-RELATED 8 497 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00165 Cme-Chr2:1232509 Cme07g00429 Cme-Chr7:2834102 0 dispersed
Cme02g00165 Cme-Chr2:1232509 Cme05g01942 Cme-Chr5:28013128 1.15E-132 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00165 - - csv:101213974 921.383