Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00215 ATGGCATCCATTAACGTTTCTTATCTTTTTATCCTTCTTTTCCTTTTAGCCTTCTCAGCCAATGCTCAGCTCTCATCTCGTTTTTACTCGAAAACTTGTCCCAAACTCGAATCGATTGTTCGTGCTGGTATGGCCAAAGCTGTAAACCAAGAAAAACGAATGGGAGCTTCGATCCTTCGCTTGTTCTTCCACGATTGCTTCGTAAATGGTTGTGATGGTTCTATATTACTTGATGATACTCCAACAATGAGGGGCGAAAAAAATGCATTGCCAAATAGGAATTCAGTTAGAGGGTTCGAAGTAATTGACGATATTAAAACTCAGGTGGAAGCTGCTTGCAATGGAACCGTTTCATGTGCTGATATTCTCGCTCTTGCCGCTCGTGATGGGGTTGATTTGCTTGGAGGACCAAATTGGGTTGTACCACTTGGTCGAAAGGACTCGAGGACAGCAAGCGAGAGTGAAGCAAACAACAATCTTCCTGCACCAAGCTCCAACCTCTCAACACTAATCTCAACGTTCGCTGCTCAAGGCTTTAACGCCCGCGAAATGACAGCTCTTTCCGGCGCTCACACCATAGGTATGGCACAATGTCGATTCTTTCGATCTCGGATCTACAATGATACCAACATCTATGGTGCCTTCGCTGCCCAGCGACAAGCTAACTGTCCAATCAACGGTGGCGACAATAACTTGGCCCCTCTTGACTCAACCAACAGTATGTTTGACAATAAATATTACGTTGACCTAACTAATAAGCGCGGCTTGTTCCATTCGGATCAAGAACTCTTTAACGGTGGTTCACAAGATGGATTGGTTCGAATCTATAGTTTAAGTTCCCTTATCTTTAGATTGGATTTTGCAAATGCGATGATCAAGATGGGAAATCTTAGTCCTGCGAGTGGAACGGTCACTGAAATTAGAAAAAATTGCAGGGTGGTGAATTAA 948 43.67 MASINVSYLFILLFLLAFSANAQLSSRFYSKTCPKLESIVRAGMAKAVNQEKRMGASILRLFFHDCFVNGCDGSILLDDTPTMRGEKNALPNRNSVRGFEVIDDIKTQVEAACNGTVSCADILALAARDGVDLLGGPNWVVPLGRKDSRTASESEANNNLPAPSSNLSTLISTFAAQGFNAREMTALSGAHTIGMAQCRFFRSRIYNDTNIYGAFAAQRQANCPINGGDNNLAPLDSTNSMFDNKYYVDLTNKRGLFHSDQELFNGGSQDGLVRIYSLSSLIFRLDFANAMIKMGNLSPASGTVTEIRKNCRVVN 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1735029 1736868 - MELO3C015445.2.1 Cme02g00215 320104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00215 315 Pfam Peroxidase 40 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 CDD secretory_peroxidase 23 314 IPR033905 GO:0004601|GO:0042744
Cme02g00215 315 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Cme02g00215 315 ProSiteProfiles Plant heme peroxidase family profile. 23 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 PRINTS Plant peroxidase signature 289 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 Gene3D - 28 315 - -
Cme02g00215 315 PANTHER PEROXIDASE 11 315 - -
Cme02g00215 315 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 SUPERFAMILY Heme-dependent peroxidases 23 315 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 PANTHER PEROXIDASE 72-RELATED 11 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme02g00215 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Cme02g00215 315 Gene3D Peroxidase, domain 2 161 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00315 Cme-Chr1:2354226 Cme02g00215 Cme-Chr2:1735029 0 dispersed
Cme02g00215 Cme-Chr2:1735029 Cme11g01435 Cme-Chr11:21285753 3.89E-126 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00215 K00430 - csv:101208932 503.442