Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00228 ACCTTTTTTAGACTTCCTTCCTTCCGCTCTTCTATTAACCCGCTCGGAGACGGAGGCCACCGCCACCGCCACCGCCACCGCCACCGCGCCGGCCACCGCTTCCTTATCGTTGTTATTTCTGCAATGAGGTTATCGTTATCTACAATTCTTGTCCTCTTTCTCTTCTTTCACCTTCTTCTCTGCTTCGCTACTTTCCCTTCCCTTTCCATTTCTCTCATAACCGTCACTAAATCCGAGTTGGTGCCCGGCGAGATCAATGCTACTGCCGACTCTAACTCCTCGAGATCCGCCAATGATGACCATAGTTTTGCTAACATAATCGATCGGGCTCTCGAGAGGGAATTTACTGAAAATGAGCAGACTGATGAAGTCGCGGATCCTGGCAGCTTCAACAATAGCGTTGCTGAGAAGCAGGCAGTTTTGGAAACTGTTGCTCGAGTTAAGTCAAAGAAGAATGAAACGAAAGAGGAGAAATCATTTCAGTTCCATGATGTCTTCCATTTAGATAATGAGAATCGAGCAGAAGACATGCCAACATTAATTGATCGAAAGGACAATGTCTTTATTATTTCAAATCCCAAGTCAAAGTATCCTGTGCTCCAATTGGATTTGAGATTGATTTCAGATCTAGTTGTTGTTATTGTTTCTGCAACTTGTGGTGGCATTGCTTTCGCTTGTGCAGGACAACCGGTCTTTACTGGATACCTGTTAGCTGGATCTCTCATTGGACCTGGAGGTTTAAGCTTTGTCAGTGAAATGGTGCAAGTTGAGACAGTTGCTCAGTTTGGTGTGATCTTCCTTCTTTTTGCATTGGGCCTGGAGTTCTCCACTACCAAACTTCGTGTAGTTCGAGCAGTGGCGGTTCTTGGAGGACTGCTTCAGATTTTCCTTTTTATGTGCTTGTGTGGAATTACTGCTTCGCTATGTGGCGGTAAATCTTCAGAGGGGGTATTTGTTGGTGCATTCTTGTCTATGTCTTCGACTGCAGTGGTCTTGAAATTTTTAATGGAGCGAAATAGCGTCAATGCCATTCATGGTCAGGTGACCATTGGTACTCTTATTCTTCAGGATTGTGCCGTAGGCTTGCTGTTTGCTCTGCTTCCAATTCTTGGTGGTACTTCTGGTGTTCTTCAAGGAGTTCTGTCCATGACTAAGTCGTTGGTGGTCTTGATTGCATTTTTGATTATTTTGACAATATTTTCTCGTACATGTGTTCCGAGGTTCCTTAAGCTTATGGTTAGCCTGTCATCTCAGACTAATGAACTATATCAATTGGCAGCTGTTGCATTCTGCTTGCTTGTTGCTTGGTGCAGTGATAAACTTGGCTTAAGCCTTGAATTGGGTTCTTTTGCGGCCGGTGTGATGATTTCAACTACTGATCTTGCTCAGCATACACTTGAACAGGTTGAGCCCATTCGGAACTTCTTTGCTGCTCTTTTTCTTGCCAGCATTGGGATGCTAATTCATGTTCATTTCCTATGGAACCACATTGATATTTTACTTGCGGCTGTAATATTGGTAATCATTATAAAGACTGTAGTGGTTACTACTGTTGTCAAGGGATTTGGATACAACAACAAGACTTCACTTCTGGTTGGGATGTCACTTGCACAAATTGGAGAATTTGCCTTTGTCCTTCTAAGCCGTGCTTCTAATCTTCATCTTGTCGAGGGAAAATTGTATATACTGCTGCTTGGGACAACTGCACTTAGCCTGGTGACTACACCATTGCTTTTCAAGCTTATTCCTGCTGTGGTGCGTATTGGAGTATTGTTGCGGTGGTTTTCACCCGATGGTTTGAGTGAGATTGGATTCAAAGGAGATGCCTTTCGAACAGATGGTGCCAAGCGCATTACTTTGGTGGTTCAAGACTCTCATGTTTCATGA 1887 43.88 TFFRLPSFRSSINPLGDGGHRHRHRHRHRAGHRFLIVVISAMRLSLSTILVLFLFFHLLLCFATFPSLSISLITVTKSELVPGEINATADSNSSRSANDDHSFANIIDRALEREFTENEQTDEVADPGSFNNSVAEKQAVLETVARVKSKKNETKEEKSFQFHDVFHLDNENRAEDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVFTGYLLAGSLIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCLCGITASLCGGKSSEGVFVGAFLSMSSTAVVLKFLMERNSVNAIHGQVTIGTLILQDCAVGLLFALLPILGGTSGVLQGVLSMTKSLVVLIAFLIILTIFSRTCVPRFLKLMVSLSSQTNELYQLAAVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHIDILLAAVILVIIIKTVVVTTVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYILLLGTTALSLVTTPLLFKLIPAVVRIGVLLRWFSPDGLSEIGFKGDAFRTDGAKRITLVVQDSHVS 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1826773 1837577 - MELO3C015457.2.1 Cme02g00228 320117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00228 628 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 51 627 IPR045158 GO:0015386|GO:0071805|GO:1902600
Cme02g00228 628 Pfam Sodium/hydrogen exchanger family 211 580 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cme02g00228 628 PANTHER K(+) EFFLUX ANTIPORTER 6 51 627 - -
Cme02g00228 628 Gene3D - 204 587 IPR038770 -
Cme02g00228 628 Coils Coil 137 157 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00228 Cme-Chr2:1826773 Cme06g00928 Cme-Chr6:6511481 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00228 - - csv:101208614 1055.05