Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme02g00246 | ATGGTTTGGCTAATTCTTATGTTAATAGGATTCAGAAACTCTCCACCCCCTTCAACTTTTTCTGCATTTCCTCCAGTTTTAAGATTCAGCAACATTAATGGACCAAGCTCAGTGCCTCAGCAAAATGAGTCAACTGAGCTACTACCGGTTATGTACCCATCAGTTGCTTCAGGTCCTTTGCCTGATACAATCAAAGGGTTTATACCGTCCGCTTCACCTCGTGCTCTGACTGAGTCACCACCATTTAATAGTATGCCTCAGCCACTTTTACCAGTTCAACCAAATGCTCCATCGATTTCACCAAGTGCACCAGAGCCAGGAGGCTCAGCTGTATCATCTGCAAATTCTCCACATTATCCTCCAGCAAGTCCCTTGCCACATGAGCAAACAAATACTTCATCAAATGTAGCTCCAACCCCTGAGCCCATTTCTCCAGCAAGCAAGTTGCCTAAGAACTCACCGGTTAGTCATCCGGTATTTCCTGAAAGACCTCCATCCATATTACCAGAGCCCGATATCTCTCCAGCAATAGCTATTTCCCCAAAAGCTGGTCACAAAAAGAGATTAGAAGCACCAGCAGCCACACCTTATAATGCACTTCCCAAGTATACGCCACCAGTGAATCATTCCCCAGAAGAAGCTCCTTCCAGTCACAATGACATAGGACATTCTCAACAACCACCGATCCTTACACCGCAAAAAGCTCCATTTCATAGTGTAAATCTTTCTCCAACTTCTCCTCCTTTGCCCTCAAATTATAAGCATCCCAGAAGCAAGAATCATATCAGTCATGCACCTGCACCATCATATCCAATTTCCTCCCACACGACGAAAGCACCGGGTCCAGTTATTTCTACAGCACAACATTCGCCAGGAAGAAGACACCATTCTCCACCTCCAAAATCAGAACCTTCGCCAATATCTCCTTCACATTATGCTCCTCCACCTCTTTCGACTCATGTTTCACCTTCTCCTTCACCACACCAAAAAACATCTGGGCATACTAGAAGACATTTTTATCCTCCTAAAGCTTCCCCATCGAAACATTCAGCAAAAAGCCCGAAGATGTCACCAATTCATACGTTGCCTCCTCCACCTCCCAATGAAGATTGTTTTACTACCCAGTGCATCGAGCCATATACAAATACTCCCCCAGGATCTCCCTGTGGATGTGTTTGGCCGATGCAAATTGGACTTCGCCTCAGTGTTTCGCTATATACATTCTTCCCTCTGGTCTCAGAGCTGGCAGCGGAAATTGCTGCTGGGGTGTTTGTAAAGCAAAGCCAAGTTCGCATCATTGGAGCCAATGCAGCTAACCAGCAACCGGATAAGACTGTTATTCTTATTGACTTAGTACCACTGGGCGAAAAATTTGACAATACTACAGCCTTTTTAACTTATCAAAGGTTTTGGCATAAGAAGGTTTCGATCAAAGCTTCCTATTTTGGGAACTATGAAGTATTATATGTTCGATATCCAGGTTTACCTCAATCACCTCCTTCTGGAGACTCAGGACTAGATAACGAGCCTTATTTCGGTAATAGTAATGACGCGAGGGCAGTAAAACCAATTGGTGTTGATGTGCAGAACAGACAGCACAAAGATAGGCTAAGTGGTGGTATGATTGCCATTGTTGCCCTATCAACTACTGTTGCCGTGGTCTTATGTGTTGCAACTGCTTGGATTTTACTCTTCAAACGTAATGATGGCCTTTGTCAGCCAAAACCAACTCCACATGTTTCGTTATCCTCCCTCAATAAGCCATCAGGTGCTGGTGGATCAGTTATGGCAACCATGCCTAGTTCTGCCTCTTTATCCATTGGATCTAGCATTGCCCCATATTCAGGATCAGCCAAGACATTCAGTGCCTCTGACATTGAGAGAGCCACCAATAATTTTGATCCTTCAAGAATATTGGGAGAGGGGGGCTTTGGACGTGTCTATAGAGGCATTCTCGAAGATGGTACTGAAGTAGCAGTCAAAGTTCTCAAGAGAGATGATCTTCAGGGTGGTCGAGAATTCTTGGCTGAAGTCGAAATGCTTAGTCGTCTCCACCATAGAAATTTGGTTAAGTTGATTGGAATATGTACTGAGGAACGTAGCCGCTCCCTGGTGTATGAACTTATTCCAAATGGCAGTGTGGAATCTCACTTGCATGGTGTTGATAAGGAAACTGCCCCACTTGATTGGGAAGCCCGGATCAAGATAGCACTCGGCGCTGCTAGGGGTTTATCCTATCTACATGAGGATTCAAGTCCTAGGGTCATACATCGAGACTTCAAATCCAGCAATATCTTGTTAGAACATGATTTTACACCAAAAGTTTCTGACTTTGGATTGGCAAGAACTGCAATGGATGAGGAAAGTAGACACATATCAACACGTGTCATGGGAACTTTCGGGTATGTAGCGCCAGAATATGCAATGACTGGTCATCTACTTGTGAAGAGTGATGTTTATAGCTACGGAGTTGTTCTTCTTGAGTTACTAACTGGGAGGAAACCAGTAGATATGTCGCAACCTCCGGGTGAAGAAAATCTGGTTTCTTGGGCTCGTCCTCTACTCACAAGCAAAGAAGGCCTAGATGTTATTATTGACAAATCACTAGATTCTAATGTTCCTTTCGAAAATATTGCTAAAGTAGCAGCCATTGCTTCAATGTGTGTGCAACCAGAGGTGTCACATCGACCTTTCATGGGAGAGGTAGTTCAAGCATTGAAACTAGTTTGCAACCAATGCAACACAACTCAAGAAACAAGCTCACATCCTGGTTCAAGCCCAGAGAGTTCAACTATCGATACGAATGATGATGAAGCATCAAGTTCAAGATACATGCTAGACTTTTTTCATAGTGAATATTTAGTACCTAACTCAATTCCAGGTCTAGATAGCATCGATACACATCTCTCAATATCAGACCTGTTAAATACTTCGATCGATAACGGGAAACAAGAATCTAGATCACTTGAAAGATGCTTCAGTTCTAGTCCTCATAGAATCAGAAAAGGTGAGAGGAATTTTTGGCAAAGAATGAAAAGATACTCAGGAAGTAGCATAAGTGAACATGGCATGCCTACTAAAGCATGGTCATAA | 3093 | 43.45 | MVWLILMLIGFRNSPPPSTFSAFPPVLRFSNINGPSSVPQQNESTELLPVMYPSVASGPLPDTIKGFIPSASPRALTESPPFNSMPQPLLPVQPNAPSISPSAPEPGGSAVSSANSPHYPPASPLPHEQTNTSSNVAPTPEPISPASKLPKNSPVSHPVFPERPPSILPEPDISPAIAISPKAGHKKRLEAPAATPYNALPKYTPPVNHSPEEAPSSHNDIGHSQQPPILTPQKAPFHSVNLSPTSPPLPSNYKHPRSKNHISHAPAPSYPISSHTTKAPGPVISTAQHSPGRRHHSPPPKSEPSPISPSHYAPPPLSTHVSPSPSPHQKTSGHTRRHFYPPKASPSKHSAKSPKMSPIHTLPPPPPNEDCFTTQCIEPYTNTPPGSPCGCVWPMQIGLRLSVSLYTFFPLVSELAAEIAAGVFVKQSQVRIIGANAANQQPDKTVILIDLVPLGEKFDNTTAFLTYQRFWHKKVSIKASYFGNYEVLYVRYPGLPQSPPSGDSGLDNEPYFGNSNDARAVKPIGVDVQNRQHKDRLSGGMIAIVALSTTVAVVLCVATAWILLFKRNDGLCQPKPTPHVSLSSLNKPSGAGGSVMATMPSSASLSIGSSIAPYSGSAKTFSASDIERATNNFDPSRILGEGGFGRVYRGILEDGTEVAVKVLKRDDLQGGREFLAEVEMLSRLHHRNLVKLIGICTEERSRSLVYELIPNGSVESHLHGVDKETAPLDWEARIKIALGAARGLSYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGEENLVSWARPLLTSKEGLDVIIDKSLDSNVPFENIAKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNQCNTTQETSSHPGSSPESSTIDTNDDEASSSRYMLDFFHSEYLVPNSIPGLDSIDTHLSISDLLNTSIDNGKQESRSLERCFSSSPHRIRKGERNFWQRMKRYSGSSISEHGMPTKAWS | 1030 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2012503 | 2017901 | - | MELO3C015475.2.1 | Cme02g00246 | 320135 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme02g00246 | 1030 | MobiDBLite | consensus disorder prediction | 157 | 171 | - | - | |
Cme02g00246 | 1030 | MobiDBLite | consensus disorder prediction | 210 | 248 | - | - | |
Cme02g00246 | 1030 | MobiDBLite | consensus disorder prediction | 916 | 938 | - | - | |
Cme02g00246 | 1030 | Gene3D | Transferase(Phosphotransferase) domain 1 | 709 | 928 | - | - | |
Cme02g00246 | 1030 | ProSiteProfiles | Protein kinase domain profile. | 633 | 909 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme02g00246 | 1030 | ProSitePatterns | Protein kinases ATP-binding region signature. | 639 | 661 | IPR017441 | GO:0005524 | |
Cme02g00246 | 1030 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 755 | 767 | IPR008271 | GO:0004672|GO:0006468 | |
Cme02g00246 | 1030 | MobiDBLite | consensus disorder prediction | 69 | 366 | - | - | |
Cme02g00246 | 1030 | PANTHER | OS01G0750732 PROTEIN | 190 | 1030 | - | - | |
Cme02g00246 | 1030 | MobiDBLite | consensus disorder prediction | 84 | 101 | - | - | |
Cme02g00246 | 1030 | SUPERFAMILY | Protein kinase-like (PK-like) | 613 | 906 | IPR011009 | - | |
Cme02g00246 | 1030 | MobiDBLite | consensus disorder prediction | 267 | 284 | - | - | |
Cme02g00246 | 1030 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 190 | 1030 | - | - | |
Cme02g00246 | 1030 | CDD | STKc_IRAK | 639 | 907 | - | - | |
Cme02g00246 | 1030 | MobiDBLite | consensus disorder prediction | 301 | 322 | - | - | |
Cme02g00246 | 1030 | Gene3D | Phosphorylase Kinase; domain 1 | 609 | 708 | - | - | |
Cme02g00246 | 1030 | Pfam | Protein tyrosine and serine/threonine kinase | 637 | 906 | IPR001245 | GO:0004672|GO:0006468 | |
Cme02g00246 | 1030 | MobiDBLite | consensus disorder prediction | 125 | 141 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme02g00246 | Cme-Chr2:2012503 | Cme11g02350 | Cme-Chr11:30503519 | 1.73E-106 | dispersed | |
Cme01g01200 | Cme-Chr1:15214978 | Cme02g00246 | Cme-Chr2:2012503 | 1.04E-48 | transposed | |
Cme04g00927 | Cme-Chr4:12444515 | Cme02g00246 | Cme-Chr2:2012503 | 0 | transposed | |
Cme07g02090 | Cme-Chr7:25650633 | Cme02g00246 | Cme-Chr2:2012503 | 1.25E-121 | transposed | |
Cme01g02844 | Cme-Chr1:35340014 | Cme02g00246 | Cme-Chr2:2012503 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64667 | PF07714 | PK_Tyr_Ser-Thr | 7.50E-49 | CL0016 | Cme | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme02g00246 | - | - | csv:101218980 | 1883.61 |