Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00269 ATGCATCTCAATGAAACAGAGAGAGAGAGCGAAAATGGAGGATCGTGTGGGGCAGTGCCGCGTGGAAGGCCATTGCCAAAGCTGGGGAAGCAAGAAAAGGATCGAATCACCATTTCCCACATGTCAGAAAATCATCAGGAGAAACTGAAAAGAAAAGGGGAATATATGGAGAATCATGAGGAGGTTGAAGGTGAGGAAGAATATGAAGTGGGACCCAATACCGTGGAGGAAGAAGAAATTGGATTTGTGGGTTCGAGCTTGACTTTGGAGAAGGTTGCTGCAGCCAAACAGTATATTGAGAATCATTACAAGGCTCAAAGAAAGCACATTCAAGAACGCAAAGAGAGGCGCTCCGTGCTTGAAAAGAGGTTGGCATCTTCAGATGTCTCAGAAGAAGAACAAATTAATCTATTGAAGGATTTGGAACGCACAGAGACTCAATACATACGACTGAAAAGGCATAAAATTTGTGTTGAGGATTTCGACCTTTTGACAATTATTGGGCGAGGTGCTTTCGGGGAGGTCAGACTTTGTCGGGAAAAGAAAACAGGGAACATATATGCCATGAAGAAGTTGAGAAAATCAGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTTGCAGAAGTTGCGAGTCACTGCATTGTGAAACTCTATTATTCCTTCCAAGATGCCGAATACTTGTATCTGATCATGGAGTATCTTCCAGGAGGTGACATGATGACTTTACTGATAAGGGAGGAAACTTTGACGGAAACTGTGGCCAGATTTTATGTCGCCCAAAGTGTTTTGGCTATAGAGTCAATTCATAAACATAACTACGTTCACAGAGACATAAAACCTGATAACCTTCTACTGGACAAAAGGGGTCATATGAAACTTTCTGATTTTGGTCTTTGCAAGCCTCTTGACTGCACAAATCTATCTGCTATAAATGAAAATGAAGTCCTTGATGATGAAAACTTGAACGACACAGTGGATATGGATGAGAGCTTTCCAGGTAAAAAAAACGGGAGGCGCTGGAAGAGCCCCCTTGAACAACTTCAGCATTGGCAGATTAACAGAAGGAAACTGGCATTTTCCACGGTCGGCACTCCAGATTACATAGCTCCTGAAGTATTGTTAAAAAAAGGATACGGTGTGGAATGCGACTGGTGGTCTCTTGGTGCAATAATGTATGAAATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAGTGACAACATGCCGAAAGATTGTGCATTGGAAAAATCACTTAAAATTCCCTGATGAGATAAGATTATCACCTGAAGCAAAAGATATGATCAGTAGGCTGCTTTGCGATGCTGAGAATAGGCTCGGTTCTGGAGGTGCAGACCAAATCAAGACTCATCCTTGGTTCAAAGATACCGATTGGGACAAACTCTATGACATAGATGCAGCGTTTAAGCCCGAGGTCAATGGGGAACTTGATACTCAGAATTTTATGCAATTCGATGAGATATTCTCTTCTGTCACTTTCTGCAAAGCTCATAGGTTTACGTCGTATCACCTGGACTCGAATGTGAAGTCAAACACTGCCCCCATTCGAACGTCGTCTGTAGACTCAACTAAAAGTGACTCGGCATTGGATAACTACACAACCACCTACTCAAGAGATGACATGGAAGCCATATTGGCATCATCCGGGGATGCTTTGTCACAGTAA 1710 42.57 MHLNETERESENGGSCGAVPRGRPLPKLGKQEKDRITISHMSENHQEKLKRKGEYMENHEEVEGEEEYEVGPNTVEEEEIGFVGSSLTLEKVAAAKQYIENHYKAQRKHIQERKERRSVLEKRLASSDVSEEEQINLLKDLERTETQYIRLKRHKICVEDFDLLTIIGRGAFGEVRLCREKKTGNIYAMKKLRKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTETVARFYVAQSVLAIESIHKHNYVHRDIKPDNLLLDKRGHMKLSDFGLCKPLDCTNLSAINENEVLDDENLNDTVDMDESFPGKKNGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEIRLSPEAKDMISRLLCDAENRLGSGGADQIKTHPWFKDTDWDKLYDIDAAFKPEVNGELDTQNFMQFDEIFSSVTFCKAHRFTSYHLDSNVKSNTAPIRTSSVDSTKSDSALDNYTTTYSRDDMEAILASSGDALSQ 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2258759 2268056 + MELO3C015495.2.1 Cme02g00269 320158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00269 569 ProSiteProfiles AGC-kinase C-terminal domain profile. 469 529 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cme02g00269 569 ProSitePatterns Protein kinases ATP-binding region signature. 167 190 IPR017441 GO:0005524
Cme02g00269 569 Gene3D Phosphorylase Kinase; domain 1 152 246 - -
Cme02g00269 569 Gene3D Transferase(Phosphotransferase) domain 1 247 485 - -
Cme02g00269 569 MobiDBLite consensus disorder prediction 1 70 - -
Cme02g00269 569 CDD STKc_NDR_like 159 502 - -
Cme02g00269 569 PANTHER SERINE/THREONINE-PROTEIN KINASE 73 505 - -
Cme02g00269 569 SUPERFAMILY Protein kinase-like (PK-like) 158 532 IPR011009 -
Cme02g00269 569 Pfam Protein kinase domain 163 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g00269 569 Pfam Protein kinase domain 361 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g00269 569 SMART serkin_6 161 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g00269 569 MobiDBLite consensus disorder prediction 26 59 - -
Cme02g00269 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Cme02g00269 569 ProSiteProfiles Protein kinase domain profile. 161 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g00269 569 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 73 505 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00269 Cme-Chr2:2258759 Cme07g00204 Cme-Chr7:1355858 0 dispersed
Cme01g01680 Cme-Chr1:23029684 Cme02g00269 Cme-Chr2:2258759 0 transposed
Cme02g01924 Cme-Chr2:25629556 Cme02g00269 Cme-Chr2:2258759 1.69E-64 transposed
Cme03g02047 Cme-Chr3:27974245 Cme02g00269 Cme-Chr2:2258759 0 transposed
Cme05g00575 Cme-Chr5:5821826 Cme02g00269 Cme-Chr2:2258759 0 transposed
Cme09g01488 Cme-Chr9:20083134 Cme02g00269 Cme-Chr2:2258759 5.71E-78 transposed
Cme12g02054 Cme-Chr12:26044146 Cme02g00269 Cme-Chr2:2258759 3.89E-79 transposed
Cme02g00269 Cme-Chr2:2258759 Cme07g00201 Cme-Chr7:1335626 8.54E-25 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64668 PF00069 Pkinase 1.20E-42 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00269 K08790 - csv:101208238 902.894