Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme02g00269 | ATGCATCTCAATGAAACAGAGAGAGAGAGCGAAAATGGAGGATCGTGTGGGGCAGTGCCGCGTGGAAGGCCATTGCCAAAGCTGGGGAAGCAAGAAAAGGATCGAATCACCATTTCCCACATGTCAGAAAATCATCAGGAGAAACTGAAAAGAAAAGGGGAATATATGGAGAATCATGAGGAGGTTGAAGGTGAGGAAGAATATGAAGTGGGACCCAATACCGTGGAGGAAGAAGAAATTGGATTTGTGGGTTCGAGCTTGACTTTGGAGAAGGTTGCTGCAGCCAAACAGTATATTGAGAATCATTACAAGGCTCAAAGAAAGCACATTCAAGAACGCAAAGAGAGGCGCTCCGTGCTTGAAAAGAGGTTGGCATCTTCAGATGTCTCAGAAGAAGAACAAATTAATCTATTGAAGGATTTGGAACGCACAGAGACTCAATACATACGACTGAAAAGGCATAAAATTTGTGTTGAGGATTTCGACCTTTTGACAATTATTGGGCGAGGTGCTTTCGGGGAGGTCAGACTTTGTCGGGAAAAGAAAACAGGGAACATATATGCCATGAAGAAGTTGAGAAAATCAGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTTGCAGAAGTTGCGAGTCACTGCATTGTGAAACTCTATTATTCCTTCCAAGATGCCGAATACTTGTATCTGATCATGGAGTATCTTCCAGGAGGTGACATGATGACTTTACTGATAAGGGAGGAAACTTTGACGGAAACTGTGGCCAGATTTTATGTCGCCCAAAGTGTTTTGGCTATAGAGTCAATTCATAAACATAACTACGTTCACAGAGACATAAAACCTGATAACCTTCTACTGGACAAAAGGGGTCATATGAAACTTTCTGATTTTGGTCTTTGCAAGCCTCTTGACTGCACAAATCTATCTGCTATAAATGAAAATGAAGTCCTTGATGATGAAAACTTGAACGACACAGTGGATATGGATGAGAGCTTTCCAGGTAAAAAAAACGGGAGGCGCTGGAAGAGCCCCCTTGAACAACTTCAGCATTGGCAGATTAACAGAAGGAAACTGGCATTTTCCACGGTCGGCACTCCAGATTACATAGCTCCTGAAGTATTGTTAAAAAAAGGATACGGTGTGGAATGCGACTGGTGGTCTCTTGGTGCAATAATGTATGAAATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAGTGACAACATGCCGAAAGATTGTGCATTGGAAAAATCACTTAAAATTCCCTGATGAGATAAGATTATCACCTGAAGCAAAAGATATGATCAGTAGGCTGCTTTGCGATGCTGAGAATAGGCTCGGTTCTGGAGGTGCAGACCAAATCAAGACTCATCCTTGGTTCAAAGATACCGATTGGGACAAACTCTATGACATAGATGCAGCGTTTAAGCCCGAGGTCAATGGGGAACTTGATACTCAGAATTTTATGCAATTCGATGAGATATTCTCTTCTGTCACTTTCTGCAAAGCTCATAGGTTTACGTCGTATCACCTGGACTCGAATGTGAAGTCAAACACTGCCCCCATTCGAACGTCGTCTGTAGACTCAACTAAAAGTGACTCGGCATTGGATAACTACACAACCACCTACTCAAGAGATGACATGGAAGCCATATTGGCATCATCCGGGGATGCTTTGTCACAGTAA | 1710 | 42.57 | MHLNETERESENGGSCGAVPRGRPLPKLGKQEKDRITISHMSENHQEKLKRKGEYMENHEEVEGEEEYEVGPNTVEEEEIGFVGSSLTLEKVAAAKQYIENHYKAQRKHIQERKERRSVLEKRLASSDVSEEEQINLLKDLERTETQYIRLKRHKICVEDFDLLTIIGRGAFGEVRLCREKKTGNIYAMKKLRKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTETVARFYVAQSVLAIESIHKHNYVHRDIKPDNLLLDKRGHMKLSDFGLCKPLDCTNLSAINENEVLDDENLNDTVDMDESFPGKKNGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEIRLSPEAKDMISRLLCDAENRLGSGGADQIKTHPWFKDTDWDKLYDIDAAFKPEVNGELDTQNFMQFDEIFSSVTFCKAHRFTSYHLDSNVKSNTAPIRTSSVDSTKSDSALDNYTTTYSRDDMEAILASSGDALSQ | 569 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2258759 | 2268056 | + | MELO3C015495.2.1 | Cme02g00269 | 320158 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme02g00269 | 569 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 469 | 529 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Cme02g00269 | 569 | ProSitePatterns | Protein kinases ATP-binding region signature. | 167 | 190 | IPR017441 | GO:0005524 | |
Cme02g00269 | 569 | Gene3D | Phosphorylase Kinase; domain 1 | 152 | 246 | - | - | |
Cme02g00269 | 569 | Gene3D | Transferase(Phosphotransferase) domain 1 | 247 | 485 | - | - | |
Cme02g00269 | 569 | MobiDBLite | consensus disorder prediction | 1 | 70 | - | - | |
Cme02g00269 | 569 | CDD | STKc_NDR_like | 159 | 502 | - | - | |
Cme02g00269 | 569 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 73 | 505 | - | - | |
Cme02g00269 | 569 | SUPERFAMILY | Protein kinase-like (PK-like) | 158 | 532 | IPR011009 | - | |
Cme02g00269 | 569 | Pfam | Protein kinase domain | 163 | 310 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme02g00269 | 569 | Pfam | Protein kinase domain | 361 | 468 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme02g00269 | 569 | SMART | serkin_6 | 161 | 468 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme02g00269 | 569 | MobiDBLite | consensus disorder prediction | 26 | 59 | - | - | |
Cme02g00269 | 569 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 280 | 292 | IPR008271 | GO:0004672|GO:0006468 | |
Cme02g00269 | 569 | ProSiteProfiles | Protein kinase domain profile. | 161 | 468 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme02g00269 | 569 | PANTHER | AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN | 73 | 505 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme02g00269 | Cme-Chr2:2258759 | Cme07g00204 | Cme-Chr7:1355858 | 0 | dispersed | |
Cme01g01680 | Cme-Chr1:23029684 | Cme02g00269 | Cme-Chr2:2258759 | 0 | transposed | |
Cme02g01924 | Cme-Chr2:25629556 | Cme02g00269 | Cme-Chr2:2258759 | 1.69E-64 | transposed | |
Cme03g02047 | Cme-Chr3:27974245 | Cme02g00269 | Cme-Chr2:2258759 | 0 | transposed | |
Cme05g00575 | Cme-Chr5:5821826 | Cme02g00269 | Cme-Chr2:2258759 | 0 | transposed | |
Cme09g01488 | Cme-Chr9:20083134 | Cme02g00269 | Cme-Chr2:2258759 | 5.71E-78 | transposed | |
Cme12g02054 | Cme-Chr12:26044146 | Cme02g00269 | Cme-Chr2:2258759 | 3.89E-79 | transposed | |
Cme02g00269 | Cme-Chr2:2258759 | Cme07g00201 | Cme-Chr7:1335626 | 8.54E-25 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64668 | PF00069 | Pkinase | 1.20E-42 | CL0016 | Cme | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme02g00269 | K08790 | - | csv:101208238 | 902.894 |