Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00279 ATGGCCAACTCTCAATTTCTCTGCTCTTCAGCTCGCTCCAAAACCGGTTTTGTTCCTCTATCAAAATCGGCTTCCTCCGTTTCGACCTCCGACCATTGGGTCAAAGCTGCCAACGCTCTCAGCCGCACCCATTTTGAGGAGGTTTGTTGCATGTTATCAGAGTTTCAAGAGGCTCAAACTGTTGACGTTGAAGGCACCAAGCTTACTGTCGCTCAGGTAACCGCCATTGCTCGTCGAAGCAATGTCAAAGTCATCATGAATGAATCTGTGGCACATGATCGTGTGGCCAAAAGTGCAAAATGGGTTGCTGAGAAAGTATCGAGTGGAATCGATATATATGGAGTTACCACTGGCTTTGGTGCCACCTCTCATCGCCGTACGACCAAAATATCCGACCTCCAAACAGAGCTTATTAGATTCCTCAATGCTGGTGTCATTGGAAAGGAGAACCTTCCATCTAGCTACTCGAAGGCAGCGATGCTTGTTAGAACAAACACATTGATGCAAGGCTACTCAGGGATTCGTTGGGAAATTCTGGAAGCTGTAGTGAAGTTGATGAATTGGAATTTGATCCCAAAGTTGCCTTTGAGAGGGACGATTACTGCTTCTGGAGATCTTGTTCCTCTGTCTTATATTGCTGGCGTTGTCACTGGAAGGCATAATTCCAAGGTTACTACCATTGAAGGTGATGAGATTAGTGCCATTGAAGCTCTCAAACGAGCTGGAATTGCAGGCCCATTTGAGCTTCAAGCAAAGGAAGGTTTAGCTCTAGTCAATGGAACTGCTGTTGGGTCAGCTGTTGCTGCTACGGTTTGCTACGACGCCAACATTTTGGCTCTTTTAGCCAGTGTTCTCTCTGCTTTGTTCTGTGAAGCCATGCTTGGGAAGCCAGAATTTACAGACCCGTTAACCCATAAGCTTAAGCACCACCCTGGCCAGATTGAATCCGCTGCAGTCATGGAGTTCCTCTTGAACCAAAGCGATTTCATGAAAGAAGCAAAAATCTGCATTGAAAATGATCCATTGACAAAGCCAAAACAAGATCGTTATGCACTTCGAACCTCTCCACAATGGCTCGGACCCCAAATTGAAGTCATTCGAATGGCAACTCATTCAATCGAAAGGGAAATCAACTCTGTGAATGATAACCCATTAATTGATGTTAGTCGAGATGTAGCTGTACATGGAGGAAACTTTCAGGGGACCCCAATTGGAGTCTCCATGGATAATCTTCGAATCGCCATCGCTGCAATTGGAAAGCTAATGTTTGCCCAATTCTCTGAACTCGTATGTCATCATTACAATAACGGATTACCATCTAATTTGAGCGGCGGACCAAATCCTAGCTTGGACTACGGCTTCAAAGGGGCGGAAATCGCCATGGCCGCTTATTGCTCTGAGCTCCAATACTTAGCAAATCCTGTCACAACCCATGTCCAAAGTGCAGAACAACACAATCAAGATGTAAACTCTCTAGGTCTAATCTCAGCCAGAAAATCCGCTGAAGCCATTGAAATACTAAAGCTCATGTCTGCAACATACATGGTAGCGCTTTGCCAAGCAATCGATTTAAGACAATACGAAGAAAATATGAGGGAGGTAGTGAAAAATGCCCTTCTACAAACCATCCGAAAAACACTCTACATGGCAGAATATGGTTCTCTTCTGGAATCAAGATTTTGCGAGAAAGATCTCTTGCAAGTAATCGAGCGCGAGGAAGTCTTCTCCTACATCGACGATCCCACCAACACATCCTACACCTTAATCCCAAAGTTACTAGAAGTTTTAGTTGAGAAAGCATTGAAAGGAGTTGCAACAGACAAAAAAGATAACAGAAACGAAACAGGGATTGCCATATTCAAGCAAATTCCGGAGTTTCTTGAGGAATTAAAGGCGAAATTGGAAAAAGACGTTGAAAATGCAAGAGGGAGATTCGAGAATGGTGATTTCGAAATTGAAAATAGAATCAAGAAATGCAGCACTTACCCGATCTACCGATTCGTGAGAAATGAATTGGGGACTCAACTGTTGAGTGGAGCAAAGAAGATTAGCCCTGGAGAAGATATTGAGAAAGTGGTGGAAGCCATTGATGAAGGGAAGCTTGGAAATGTTTTGATGGAGTGTTTGAAGAATTAG 2136 43.96 MANSQFLCSSARSKTGFVPLSKSASSVSTSDHWVKAANALSRTHFEEVCCMLSEFQEAQTVDVEGTKLTVAQVTAIARRSNVKVIMNESVAHDRVAKSAKWVAEKVSSGIDIYGVTTGFGATSHRRTTKISDLQTELIRFLNAGVIGKENLPSSYSKAAMLVRTNTLMQGYSGIRWEILEAVVKLMNWNLIPKLPLRGTITASGDLVPLSYIAGVVTGRHNSKVTTIEGDEISAIEALKRAGIAGPFELQAKEGLALVNGTAVGSAVAATVCYDANILALLASVLSALFCEAMLGKPEFTDPLTHKLKHHPGQIESAAVMEFLLNQSDFMKEAKICIENDPLTKPKQDRYALRTSPQWLGPQIEVIRMATHSIEREINSVNDNPLIDVSRDVAVHGGNFQGTPIGVSMDNLRIAIAAIGKLMFAQFSELVCHHYNNGLPSNLSGGPNPSLDYGFKGAEIAMAAYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISARKSAEAIEILKLMSATYMVALCQAIDLRQYEENMREVVKNALLQTIRKTLYMAEYGSLLESRFCEKDLLQVIEREEVFSYIDDPTNTSYTLIPKLLEVLVEKALKGVATDKKDNRNETGIAIFKQIPEFLEELKAKLEKDVENARGRFENGDFEIENRIKKCSTYPIYRFVRNELGTQLLSGAKKISPGEDIEKVVEAIDEGKLGNVLMECLKN 711
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 2336486 2338777 - MELO3C015503.2.1 Cme02g00279 320168
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00279 711 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 198 214 IPR022313 GO:0016841
Cme02g00279 711 SUPERFAMILY L-aspartase-like 32 710 IPR008948 GO:0003824
Cme02g00279 711 Gene3D Fumarase/aspartase (Central domain) 262 710 - -
Cme02g00279 711 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 31 710 IPR005922 GO:0005737|GO:0006559|GO:0016841
Cme02g00279 711 Pfam Aromatic amino acid lyase 68 544 IPR001106 -
Cme02g00279 711 Gene3D - 21 261 IPR024083 -
Cme02g00279 711 PANTHER HISTIDINE AMMONIA-LYASE 35 710 IPR001106 -
Cme02g00279 711 CDD PAL-HAL 68 525 IPR001106 -
Cme02g00279 711 Gene3D - 528 654 IPR023144 -
Cme02g00279 711 PANTHER PHENYLALANINE AMMONIA-LYASE 35 710 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00279 Cme-Chr2:2336486 Cme07g01984 Cme-Chr7:24968777 0 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00279 K10775 - csv:101205510 1308.89