Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g00305 ATGCCAAGAGGAAGCTTAGAGAACCAACTCTTTCGAAGATTTTCAGTGTCATTATCATGGTCAACAAGAATGAAAATAGCCTTAGGAGCAGCCAAGGGATTAGCCTTTCTTCATGGAGCTGAAAAACCAGTGATTTATAGAGATTTCAAAGCTTCTAACATTTTGTTAGATTCTGATTACAATGCAAAGCTTTCAGATTTTGGTTTGGCTAAAGATGGACCTGATGGAGATGATACACATGTCTCCACCCGAGTCATGGGTACTGAAGGCTACGCTGCTCCCGAATATGTTATGACTGGTCATTTGACGGCAATGAGTGATGTGTACAGTTTCGGAGTAGTACTTTTGGAGTTGTTGACTGGACGACGATCGCTCGACAAGACTCGACCGCACCGTGAACAAAATTTGGTCGAGTATGCCCGTCCGATGTTGATGGACAACCGAAAGCTTTCCCGGATCATGGACATGAGACTGGAAGGACAATACTCGGAGACCGGAGCGAGAAAAGCGGCAGCATTGGCGTACCAATGTCTGAGCCACCGCCCAAAGCAGAGACCGACGATGAACGAAGTGGTGAAAATCTTGGAGCCACTTAAGGACTACCAAGACATGCCCATTGGAACCTTTGTTTTCGAGATGCCGGATTCTTCTCCGGTGTCATCAAACGGCCACCATAGACAAAATCATGGACACCGACATTCTAGATCGCCAAATTCGCCATTGACAGAAAATGGGGCGAGCAATGGGAACCGACGACCGACAAGCTCACCATTGCACCCGAGAAGCGGCGGCCGAAGACCATAG 804 47.51 MPRGSLENQLFRRFSVSLSWSTRMKIALGAAKGLAFLHGAEKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPDGDDTHVSTRVMGTEGYAAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSLDKTRPHREQNLVEYARPMLMDNRKLSRIMDMRLEGQYSETGARKAAALAYQCLSHRPKQRPTMNEVVKILEPLKDYQDMPIGTFVFEMPDSSPVSSNGHHRQNHGHRHSRSPNSPLTENGASNGNRRPTSSPLHPRSGGRRP 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2514000 2515499 + MELO3C015524.2.1 Cme02g00305 320194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g00305 267 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 239 - -
Cme02g00305 267 MobiDBLite consensus disorder prediction 212 267 - -
Cme02g00305 267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 44 56 IPR008271 GO:0004672|GO:0006468
Cme02g00305 267 Pfam Protein kinase domain 7 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g00305 267 PANTHER OS01G0588500 PROTEIN-RELATED 1 239 - -
Cme02g00305 267 SUPERFAMILY Protein kinase-like (PK-like) 1 222 IPR011009 -
Cme02g00305 267 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme02g00305 267 MobiDBLite consensus disorder prediction 234 257 - -
Cme02g00305 267 Gene3D Transferase(Phosphotransferase) domain 1 1 207 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme02g00305 Cme05g02074 CCT
Cme02g00305 Cme05g02074 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00305 Cme-Chr2:2514000 Cme10g00446 Cme-Chr10:2831318 4.04E-103 dispersed
Cme02g00305 Cme-Chr2:2514000 Cme05g02074 Cme-Chr5:28947038 1.74E-127 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64670 PF00069 Pkinase 1.20E-30 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g00305 - - cmo:103492538 533.487